Brachyspira pilosicoli B2904: B2904_orf32
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Entry
B2904_orf32 CDS
T02225
Name
(GenBank) ATP dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpj
Brachyspira pilosicoli B2904
Pathway
bpj03420
Nucleotide excision repair
bpj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B2904_orf32
03430 Mismatch repair
B2904_orf32
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpj03400
]
B2904_orf32
Enzymes [BR:
bpj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B2904_orf32
DNA repair and recombination proteins [BR:
bpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B2904_orf32
MMR (mismatch excision repair)
Other MMR factors
B2904_orf32
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
LepB_GAP_N
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AFR69390
UniProt:
J9UFB8
LinkDB
All DBs
Position
28947..31148
Genome browser
AA seq
733 aa
AA seq
DB search
MQFFWFFYSNKRTGGVGAKPPQTIKFKNLINFNILYYFLINKHYACIYFVIIYNKFPTYN
TYNNKGFLFFMALMLNEEQKKAVEHINGPMLALAGAGSGKTRVITERIAYLIKNGIDPSN
ILAVTFTNKAANEMRERIASLLKEKPKQLVISTFHSFCVRVLKLDIDKLGYKKNFSIYSS
SDSRTLIRNILREVKVNTLNYDENLFAWYIDRYKNNLMKPNEVVPHDDLEKIAKRVYEVY
QNYLKGYNAVDFNDLINLTIDLYINFPEVLDKYQERFKYIMVDEYQDTNLAQYKLTSLLA
SKYKNIVVVGDDDQSIYAFRGADVSNILSFENEYPEAKIITLNKNYRSTKAILEAAHAVI
SNNTQRKAKEVVAVNDEGIPPVIMPCEDERDEAQFIAENITQTAINKNLNYENFAILFRM
NSQSRIFEEALRFRGIPYTVVGAFQFYERKEIKDILAYLNLFVNPEDEVSLLRVINIPKR
GIGAVAINNLNEISIKNGVSLYQTLLDYENIDDIPPKAKTGIKDFLDIIHYYNEIFTVDK
NTLEKPKLYENINKFLDTIAYHNEVLNSSDTKEQGSKKIENIESLMNGIAEYEKGNKNAT
LKNYLDRILLMSIEENNEEEKKKGVMLMSIHAAKGLEFPYVYICGMEDGILPHHKSSSDR
EIEEERRLCYVAMTRAKKHLTLTYCMKRKKQGRDVECTPSIFLEEMRKGLPEDMAMDEEE
FFSNLKATLKPDS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcttttggttcttttatagcaataaaagaactgggggtgtgggggcaaagcca
ccacaaacaataaaatttaaaaacttaataaattttaatatattatactattttctaatc
aataagcactatgcttgtatatatttcgttataatatataataaatttccaacttataat
acttataataataaaggttttttattttttatggcattaatgttaaatgaagagcaaaaa
aaagctgtagagcatattaatggacctatgcttgcattagccggtgcaggaagcggtaag
accagagtaattacagagagaattgcctatttaataaaaaacggaatagaccctagcaat
atacttgctgttacttttacaaataaagctgctaatgaaatgcgtgagagaatagctagt
ttgcttaaagaaaaacctaaacaattagtaataagcacttttcattctttttgtgtgagg
gtgcttaaacttgatatagataagcttggatacaaaaaaaactttagtatatattcttct
tcagacagcagaactcttataagaaatattttgagagaggttaaagtaaatactcttaat
tatgatgaaaacctatttgcttggtatatagacagatacaaaaacaatttaatgaagcca
aatgaagtagtgcctcatgatgatttggagaagattgcaaaaagagtttatgaggtttat
cagaattatttgaaagggtataatgctgttgattttaatgaccttattaatttaactatt
gatttatatattaattttcctgaggttttagacaaatatcaagagagatttaaatatatt
atggttgatgaatatcaagacaccaacttagcacagtataaactcacaagccttttagct
tcaaaatataaaaacatagttgtagtaggcgatgatgatcagagtatatacgcttttagg
ggtgctgatgtatcaaatatactttcttttgaaaacgaatatccagaagctaaaataatt
acattaaacaaaaattatagaagcactaaagcgatacttgaagcggcacatgctgtaata
agcaacaatacgcaaagaaaagcaaaagaggttgttgcggttaatgatgaaggtatacct
cctgttattatgccttgcgaagatgagagagatgaggcacagtttatagcagaaaatatc
acacaaactgcaataaacaaaaatttaaactacgaaaactttgccatactttttagaatg
aactctcagtcgcgtatttttgaagaggctttaagatttagaggcattccatatactgtt
gttggtgcttttcagttttatgagagaaaagagattaaagatatacttgcatatttaaac
ctatttgttaatccggaagatgaggtttctcttttgagggttattaatataccaaaaagg
ggaattggtgctgttgcaattaataatctcaatgaaataagtataaaaaacggagtatca
ttatatcaaacattactcgactatgagaatatagacgatatacctccaaaggcaaaaaca
ggaataaaagattttttggatattattcattattataatgagatatttacagttgataaa
aacacattagaaaaaccaaagctctacgaaaacattaataaatttttagatacaattgca
tatcataatgaagtattaaactcaagcgatacaaaagagcagggaagcaaaaaaatagaa
aatattgaatctctaatgaatggtatagctgaatatgagaaaggaaataaaaacgctact
ttaaaaaattatttagatagaatacttttaatgagcatagaagaaaataatgaagaagag
aaaaagaaaggtgtaatgcttatgagtatacatgcggcaaagggtttagagtttccttat
gtttatatatgcggcatggaagacggcatacttcctcatcataaaagttcatcagacaga
gagatagaagaagagagaagactttgctatgttgctatgacgagggcaaagaagcacctc
acattaacatactgtatgaaaagaaaaaagcaaggaagagatgttgaatgcactccgtca
atatttttggaggagatgagaaaggggcttccagaagatatggcgatggacgaagaagag
tttttttcaaacctcaaagcaacattgaagccagattcttaa
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