Brachyspira pilosicoli B2904: B2904_orf641
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Entry
B2904_orf641 CDS
T02225
Symbol
ligT
Name
(GenBank) 2-5 RNA ligase LigT
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bpj
Brachyspira pilosicoli B2904
Brite
KEGG Orthology (KO) [BR:
bpj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpj03016
]
B2904_orf641 (ligT)
Enzymes [BR:
bpj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
B2904_orf641 (ligT)
Transfer RNA biogenesis [BR:
bpj03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
B2904_orf641 (ligT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
Coatomer_b_Cpla
DASH_Dad1
DUF4917
Motif
Other DBs
NCBI-ProteinID:
AFR69989
UniProt:
J9URR3
LinkDB
All DBs
Position
complement(637390..637920)
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AA seq
176 aa
AA seq
DB search
MRAFLALNIDENIKNKYHNLLLKKIDDNIAEVKFVNKNKMHITLVFFENIKESDIEKIKS
SLEKTSNVIKPFNISFEKFSYFTNKFNDINVLFVKANCKELDEYVKHLRDNINIKYDKKD
FKSHLTLARVKKVYDNDKLKEIINNIHFEKSSFLANSITLYESDFVNYREIFTLTF
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgagagcgttcttagcattaaatattgatgaaaatataaaaaataaataccataatctt
ttactaaaaaagatagatgataatatagcagaagtgaaatttgtaaataaaaataaaatg
catatcacattagttttttttgaaaatataaaagaaagcgatatagaaaaaataaaatca
tcattagaaaaaacaagcaatgtaataaagccttttaatatatcatttgaaaaattctca
tatttcacaaataagtttaatgatataaatgttttgtttgtaaaagcaaattgcaaagaa
ttagatgaatacgtaaagcatttaagagataatattaatataaaatatgacaaaaaagat
tttaaatcgcatctcacactggcaagagtaaaaaaggtttatgataatgataaattaaaa
gagataataaataatattcattttgaaaagagcagttttttagcgaactctatcacactt
tacgaaagcgactttgttaattacagagaaatattcacattaacattttaa
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