Brachyspira pilosicoli B2904: B2904_orf983
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Entry
B2904_orf983 CDS
T02225
Symbol
ygcA
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bpj
Brachyspira pilosicoli B2904
Brite
KEGG Orthology (KO) [BR:
bpj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpj03009
]
B2904_orf983 (ygcA)
Enzymes [BR:
bpj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
B2904_orf983 (ygcA)
Ribosome biogenesis [BR:
bpj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
B2904_orf983 (ygcA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
AAA_17
Motif
Other DBs
NCBI-ProteinID:
AFR70326
UniProt:
J9UE73
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All DBs
Position
1008246..1009421
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AA seq
391 aa
AA seq
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MKVEIIDTAYGGYGVAKEGKVIFVAHSVEGDVVDISIKKENKNFCYANINSIIQPSKHRI
KAKCKYAGICGGCVFNHIEYNKQLEIKKSIVLNSIRNIEYKNKINIIKSPNEHYRLRVNM
IAQNGNIGFYKFNTNEFVNIDECIILKEKLFCKIKNFVNRSNITGNIYAIESNNDKTLSF
ADIIKQNKNIDTSYFDGITIKQKKKTKIYGIDKTNYNTYFGVVPLSHKSFFQSNHYLLDE
FQKSAVKYFNEYDKNIVELYAGSGFFSVAIKEKLKSLNIDYKLISSEISSDAIKIAKDII
KEDASETLKKINYNLDSLFVDPPREGLDKKVIENIIRIKPKKIIYISCNPMTFSRDINLL
KEYYQLIDLNIIDMFPDTYHIELISCLKLIK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagaaataatagatacagcttatggcggatatggcgttgctaaagaaggaaaa
gttatatttgtagcacattctgttgaaggcgatgtagttgatatatccataaaaaaagaa
aataaaaacttttgctatgctaatataaatagtatcatacagccttcaaagcatagaata
aaagcaaaatgtaaatatgcaggtatttgcggtgggtgtgtatttaaccatattgaatat
aataagcaattagaaataaaaaaaagtatagtattaaactctataagaaatattgaatat
aagaataaaataaacatcataaaatcacctaatgaacattatagacttagagtaaatatg
atagctcaaaacggaaatataggcttttataaatttaatactaatgagtttgtgaatata
gatgaatgtataatattaaaagagaaactattttgtaaaataaaaaactttgttaatcgt
agtaatataactggaaatatttatgcgatagaaagtaataatgacaaaacgctatcattt
gctgatattataaaacaaaataaaaatatagatacaagctattttgatggaataactata
aaacaaaaaaagaaaacaaaaatatacggcatagataaaacaaattacaacacatatttt
ggagtagtgccattatcacataaaagcttttttcaatcaaatcattatctgttagatgag
tttcaaaagagtgctgttaaatattttaatgaatatgataagaatatagttgagctttat
gccggaagcggatttttttctgttgctattaaagaaaaattaaaaagtttaaatattgat
tataaattaatatcttctgagataagttctgatgctataaagattgcaaaagatattata
aaagaagatgcaagcgaaacattaaaaaaaataaattataatctagattcattatttgtt
gatcctcctcgtgaaggattagataaaaaagtaatagaaaacattattagaataaaacca
aaaaaaattatatatatttcttgtaaccctatgacattttcaagagatattaatttatta
aaagaatattatcaattaatagacttaaatataatagatatgtttccagacacttatcat
atagaattaatttcttgtttaaaactaataaaataa
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