KEGG   Burkholderia pseudomallei NCTC 13179: BBK_1259
Entry
BBK_1259          CDS       T02894                                 
Symbol
dapF
Name
(GenBank) dapF: diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
bpk  Burkholderia pseudomallei NCTC 13179
Pathway
bpk00300  Lysine biosynthesis
bpk00470  D-Amino acid metabolism
bpk01100  Metabolic pathways
bpk01110  Biosynthesis of secondary metabolites
bpk01120  Microbial metabolism in diverse environments
bpk01230  Biosynthesis of amino acids
Module
bpk_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:bpk00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    BBK_1259 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BBK_1259 (dapF)
Enzymes [BR:bpk01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     BBK_1259 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: AGZ29180
LinkDB
Position
1:1496661..1497530
AA seq 289 aa
MKLSFTKMHGAGNDFVVLDGYTRALPPLTGAQVRALADRHFGIGADQLLLVEKPTVDGAD
FKYRIFNCDGGEVEHCGNGARCFVKFVRDHGLTGKASVRVEVKHGVITLTMQDNGEVVVD
MGAPVFEPARVPFDASGLDGRREGADTLWPLPVNGVTRWISVVSMGNPHAVQIVDDAEAF
AVRVDGPAIERDPRFPQRVNAGFMQIVSRHEVNLRVYERGAGETLACGTGACAAVAAGIR
RGRLDSPVTVHTHGGTLTISWNGACDERAPLMMAGPATTVFEGVIELPA
NT seq 870 nt   +upstreamnt  +downstreamnt
atgaaactctcgttcaccaagatgcacggtgcgggcaacgacttcgtcgtgctcgacggc
tacacccgcgcgctgcccccgctcaccggcgcgcaggtgcgcgcgctcgccgaccgccac
ttcgggatcggcgccgatcagttgctgctcgtcgaaaagccgaccgtcgacggcgccgat
ttcaaataccggatcttcaactgcgacggcggcgaagtcgagcactgcggcaacggcgcg
cgctgcttcgtcaagttcgtccgcgaccacgggctcaccggcaaggcgagcgtgcgcgtc
gaggtgaagcacggcgtgatcacgctgacgatgcaggacaacggcgaggtcgtcgtcgac
atgggcgcgcccgtgttcgagccggcgcgcgtgccgttcgacgcgagcggcctcgacggc
cgccgcgagggcgccgacacgctctggccgctgcccgtgaacggcgtgacgcgctggatc
tcggtcgtgtcgatgggcaatccgcacgcggtgcagatcgtcgacgacgccgaggcgttc
gcggtgcgcgtcgacgggccggcgatcgagcgcgatccgcgtttcccgcagcgcgtgaac
gcgggcttcatgcagatcgtgtcgcgtcacgaagtgaacctgcgcgtctacgagcgcggc
gcgggcgaaacgctcgcgtgcggcacgggcgcgtgcgcggccgtcgcggccggcatccgg
cgcgggcgactcgattcgcccgtcacggtccatacgcacggcggcacgctgacgatctcg
tggaacggcgcgtgcgacgagcgcgcgccgctcatgatggccggccccgcgaccaccgtc
ttcgaaggcgtgatcgagctgcccgcctga

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