Burkholderia pseudomallei NCTC 13179: BBK_1330
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Entry
BBK_1330 CDS
T02894
Name
(GenBank) alkA N-terminal domain protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bpk
Burkholderia pseudomallei NCTC 13179
Pathway
bpk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBK_1330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpk03400
]
BBK_1330
Enzymes [BR:
bpk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BBK_1330
DNA repair and recombination proteins [BR:
bpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBK_1330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AGZ27458
LinkDB
All DBs
Position
1:complement(1571479..1572420)
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AA seq
313 aa
AA seq
DB search
MSAAVEPAAVRPDSVVLELPFKSPYDWPRVLRFFAGRAIPGVEAVGDGAYRRTVDHHGAI
GTLTVRKHPRKRCLVALVEGDAARHADAAFAARLSTMFDLQADPAAIGAHLARDAWFAPL
VGAAPGLRVPGAWSGFELIVRAIVGQQVSVKAATTIVGRLVERAGERLAPHAPGAIGWRF
PEPAALAACDVSRIGMPGKRAAALQGVARAVASGDVPLEAYASDPAGVRAALLALPGIGP
WTVEYVAMRAWRDADAWPATDLVLMQAIVARDPALDRPASQRLRADAWRPWRAYAAMHLW
NEIADRAGSARGG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgccgccgtcgaaccggccgccgtgcggcccgacagcgtcgtgctcgagctgccg
ttcaaatcgccgtacgattggccgcgcgtgctgcgcttcttcgcggggcgcgcgattccg
ggcgtcgaggcggtcggggacggcgcgtatcggcgcacggtcgaccatcacggcgcgatc
ggcacgttgacggtgcgcaagcatccgcgcaagcgctgtcttgtcgcgctcgtcgagggc
gatgcggcgcggcatgcggacgctgcattcgccgcgcggctttcgacgatgttcgatttg
caggccgatccggccgcgatcggtgcgcatctcgcgcgcgacgcgtggttcgcgccgctc
gtcggcgccgcgcccggcctgcgcgtgccgggcgcgtggtcgggcttcgagctgatcgtg
cgcgcgatcgtcggccagcaggtgagcgtgaaggccgcgacgacgatcgtcgggcggctc
gtcgagcgcgcgggcgagcggcttgccccgcacgcgccgggcgcgatcggctggcggttt
ccggagcccgccgcgctcgccgcgtgcgacgtgtcgcgcatcgggatgccgggcaagcgt
gccgcggcgctgcagggcgtcgcgcgcgcggtcgcctcgggcgacgtgccgctcgaggcg
tacgcgagcgatccggccggcgtgcgcgccgcgctgctcgcgctgccggggatcggcccg
tggaccgtcgaatacgtcgcgatgcgcgcatggcgcgacgccgacgcatggcccgcgacc
gacctcgtgctgatgcaggcgatcgtcgcgcgcgacccggcgctagaccggccggcaagc
cagcgcctgcgcgccgatgcatggcggccgtggcgcgcgtatgcggcgatgcatctatgg
aacgagatcgccgatcgcgccggttcggcgcgcggcggatag
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