Burkholderia pseudomallei NCTC 13179: BBK_1655
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Entry
BBK_1655 CDS
T02894
Symbol
recQ
Name
(GenBank) recQ: ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bpk
Burkholderia pseudomallei NCTC 13179
Pathway
bpk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBK_1655 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpk03019
]
BBK_1655 (recQ)
03400 DNA repair and recombination proteins [BR:
bpk03400
]
BBK_1655 (recQ)
Enzymes [BR:
bpk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBK_1655 (recQ)
Messenger RNA biogenesis [BR:
bpk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BBK_1655 (recQ)
DNA repair and recombination proteins [BR:
bpk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BBK_1655 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AGZ29717
LinkDB
All DBs
Position
1:1934467..1936314
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AA seq
615 aa
AA seq
DB search
MSRSLEILNEVFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRSEAGR
GAGIVVSPLIALMQDQVAALSEVGVRAAYLNSTLSGAEAAATERALRDGDIDLLYVAPER
LMTPRFLDLLERARIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPDVPRIALTATAD
AITRDEIVQRLALDDARIFVSSFDRPNIRYRIVEKDNARSQLLDFIRAEHTNADGTTDAG
VVYCLSRRKVEETAEWLKAQGVRALPYHAGMEFEIRQKHQEMFQREEGVVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPANAWMAYGLGDVVQQRKMIDESEADD
THKRVQTSKLDALLGLCETASCRRVRLLAYFGETSGPCGNCDTCLEPPATWDATREAQMA
LSCVFRAQRASGFNFGASHLIEVLRGARTEKVQQRGHDSLSTFGIGAELSEAEWRAIFRQ
LVAFGYLAVDHGGFGALVLTEASKPVLKGEEKVTLRRYVKPARTRQSSGRSGARVDPTAG
MSARERACWERLRAWRAETAKSDGVPAYVIFHDATLAEIARNAPESIDDLRHIPGIGARK
LDRFGDEILEVVESA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgttcgctcgaaattctcaacgaagtcttcggctatcccgccttccgaggtcaa
cagggcgagatcgtcgagcacgttgcggcgggcggcgactgtctcgtgctgatgcccacg
ggcggcggcaagtcgctctgctaccagattccggcgctcgtgcgcagcgaagcgggccgc
ggcgcgggcatcgtcgtgtcgccgctcatcgcgctgatgcaggatcaggtcgccgcattg
tccgaggtcggcgtgcgcgccgcgtatctgaactcgacgctgtcgggggccgaggcggcc
gcgaccgaacgcgcgctgcgcgacggcgacatcgatctgctctacgtcgcgcccgagcgg
ctgatgacgccgcgcttcctcgatctgctcgagcgcgcgcgcatcgggcttttcgcgatc
gacgaggcgcactgcgtatcgcagtgggggcacgatttccggcccgagtacattcagctg
tcggtgctgcacgagcgctttccggacgtgccgcggatcgcgctgaccgcgaccgccgat
gcgatcacccgcgacgagatcgtgcagcgtctggcgctcgacgacgcgcgaatcttcgtg
tcgagcttcgaccggccgaacatccgctaccggatcgtcgaaaaggacaacgcgcgctcg
cagttgctcgacttcattcgcgccgagcatacgaacgccgacggtacgaccgacgccggc
gtcgtgtactgcctgtcgcgccgcaaggtcgaggagacggccgaatggctgaaggcgcaa
ggggttcgtgcgctgccgtatcacgcgggaatggagttcgagatccggcagaagcaccag
gagatgttccagcgcgaggaaggggtcgtgatgtgcgcgacgatcgcgttcggcatgggc
atcgacaagccggacgtgcgcttcgtcgcacacctggatctgccgaagagcgtcgaaggc
tattaccaggagaccggacgcgcggggcgcgacggcttgccggcgaacgcgtggatggcg
tacgggctcggcgacgtcgttcagcagcgcaagatgatcgacgaatcggaagccgacgac
acgcacaagcgtgtccagacgtcgaagctcgacgcgctgctcgggctgtgcgagacggca
tcgtgccgccgcgtgcggctcctcgcgtatttcggcgagacgagcggcccgtgcggcaac
tgcgacacctgcctcgagccgccggcgacatgggacgcgacgcgcgaagcgcagatggcg
ctgtcgtgcgtattccgcgcgcagcgcgcaagcggcttcaatttcggcgcgagccatctg
atcgaagtgctgcgcggtgcgcggaccgagaaggtccagcaacgcggccacgacagtctc
agcacgttcggcatcggcgccgagttgtccgaagccgaatggcgcgcgatcttccggcag
ctcgtcgcgttcggctatctcgccgtcgaccacggcggcttcggcgcgctcgtgctgacg
gaggcgagcaagccggtgctcaagggcgaggagaaggtcacgctgcgccgctacgtgaag
ccggcgcgcacacggcagtcctccggccgcagcggcgcgcgcgtcgatccgacggccggc
atgagcgcgcgcgagcgcgcgtgctgggagcgcttgcgcgcgtggcgcgcggaaacggcg
aagagcgacggcgtgcctgcgtacgtgatcttccacgacgcgacgctcgcggagatcgcg
cgcaacgcgcccgaatcgatcgacgatctgcgccatatccccggaatcggcgcgcgcaag
ctcgatcgcttcggcgacgagattctcgaggtcgtcgagtcggcctga
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