Burkholderia pseudomallei NCTC 13179: BBK_1768
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Entry
BBK_1768 CDS
T02894
Name
(GenBank) uvrD/REP helicase N-terminal domain protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpk
Burkholderia pseudomallei NCTC 13179
Pathway
bpk03420
Nucleotide excision repair
bpk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBK_1768
03430 Mismatch repair
BBK_1768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpk03400
]
BBK_1768
Enzymes [BR:
bpk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBK_1768
DNA repair and recombination proteins [BR:
bpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBK_1768
MMR (mismatch excision repair)
Other MMR factors
BBK_1768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AGZ28102
LinkDB
All DBs
Position
1:2039595..2041550
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AA seq
651 aa
AA seq
DB search
MSAAPESLGNDRDAHVVEEICGYITASPPRSFFLFAGAGSGKTRTLVEVLRRITGVVKHD
AGDRYAARLRSRGQSVRVITYTNNATAVVNGRLGENYLTAVSTIHAFCWELIKGFDEDIR
DALLARNAESLATAKAKALSKAKGESDRDREKYAEIEAKAEEIRKIDAFIYHPDSNTYGQ
GALSHTDVLHVTAWLIRERPTLQRILEDRHPLILIDESQDTMKSVLDALFELSMSRPGHI
TLGLLGDHRQRIYPDGHDDLPSHVPEDWARPALQMNHRSQQRIVDLINKIWDADIEGRTQ
PKTGVPQHSRTEKNGGTVRLFVGDTKTSTAEKIRRESDCALAMAAETSCAAWQDGTRGYK
TLALEHKLAAKRGDFFDAYSAMDLLDKDAAMPKSNGERTGPAMVRPLLGPMLELAQCLQA
DGSLDEFAAVDVLRRHGTLANLPEASADRQAALDKLHAAVLKFAGVISMPEATVRDVLAP
VLEGGIFDADLRLVQAYGDTSPPPPEPKPRSKEAKEDRRRRGWCALFSTPWQQIARYRAY
LSGDAELATHQVVKGSEFKHVMVVMDDEEAGGSLFSYDKLFGAEELSSNDRENVDEGNET
IIDRTLRLLYVTCSRAEESLALVLWAKNPAAALDAIKRSEWFAANEVSALE
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccgcgccggaatccctcggaaacgaccgcgacgctcacgtggtcgaagaaatc
tgcggctacattacggcgagcccacctcgcagctttttcttgttcgctggcgccgggtcg
gggaagacccgaacattagtggaggttttgcgccgaattaccggagtagtgaagcatgac
gcgggtgaccggtacgcagcgcggcttcggtctcgtggccaatcggtgcgcgtcatcacg
tataccaacaacgctaccgccgtcgtcaacggccgacttggcgagaattacctgactgcg
gtgtcgaccatccacgccttctgctgggaactcatcaagggtttcgacgaagatatccga
gacgccctgctcgctcgcaatgccgagagccttgcgactgccaaggccaaggctttgagc
aaagcaaagggggaatctgatagggaccgggagaagtacgcagagatcgaagcgaaggct
gaagaaatccgaaaaatcgatgcatttatctatcatccggacagcaacacctacgggcaa
ggcgcgctctcgcacaccgacgttctacatgtgacagcttggctcattcgtgaacgacca
acattgcagcgcatcctcgaggaccgacaccctctcatcctcatcgatgaatcgcaggac
acgatgaaaagtgtgctcgacgcgttgttcgagctatcgatgagccgtcccggacacatt
acgctcggactcttgggcgaccatcggcagcggatttatcccgacgggcacgacgatctg
ccgtcgcacgtaccggaggactgggcacgccccgcgctgcagatgaaccatcgcagtcag
caacgcatcgtcgatctcatcaacaaaatctgggacgcggatattgaaggccgtacccag
cccaagactggcgtgcctcagcattcccggacggaaaaaaacggcggaaccgtgcgcctt
ttcgttggcgataccaagacgagcacggccgagaagattaggagggagtcggattgcgcc
ctcgccatggctgcggagactagctgcgctgcctggcaagatggcacgcgtggctataag
acgctggcgcttgagcacaaactggccgccaagcgcggcgacttcttcgacgcgtatagc
gcgatggacctgctggacaaggacgccgcgatgcctaagagcaacggtgagcggaccggt
cccgcgatggttcggccgctgcttggcccaatgctcgaactcgcccagtgtctgcaagca
gacggctcgctggacgagttcgctgctgttgacgtgctgcgtcggcacggaacccttgca
aacctgccggaggccagcgctgatcgtcaagctgccttggacaagctccatgcggcagtc
ttgaagttcgcgggcgtcatctccatgccggaagcgacggtccgagatgtattggcgccg
gtcctggaaggagggatattcgatgctgacctccgcctagtccaggcgtacggagacacc
tcgcctccaccacccgaaccgaaacccagaagcaaggaagcaaaggaagatcggcgcagg
cgcggatggtgtgctctcttttccacgccctggcaacagattgcccggtatcgcgcctat
cttagcggagacgcggaactcgcgactcatcaagtcgtcaagggctccgagttcaagcac
gtgatggtcgtgatggacgatgaggaagctggtggctcgctgttctcttacgataagctt
ttcggtgccgaggagttgagttcgaatgaccgcgagaacgtcgacgagggaaacgagacc
atcatcgatcggactctgcgacttctgtacgtcacctgtagccgagcagaggaaagcctc
gcgctagttctgtgggcaaagaatccggctgcggcgcttgacgcaatcaaacggtcagaa
tggtttgccgctaacgaggtgtccgctctggagtag
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