KEGG   Burkholderia pseudomallei NCTC 13179: BBK_1785
Entry
BBK_1785          CDS       T02894                                 
Symbol
hsdR
Name
(GenBank) hsdR: type I site-specific deoxyribonuclease, HsdR family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
bpk  Burkholderia pseudomallei NCTC 13179
Brite
KEGG Orthology (KO) [BR:bpk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bpk02048]
    BBK_1785 (hsdR)
Enzymes [BR:bpk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     BBK_1785 (hsdR)
Prokaryotic defense system [BR:bpk02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   BBK_1785 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like HSDR_N_2 SNF2-rel_dom T1RH-like_C SpecificRecomb
Other DBs
NCBI-ProteinID: AGZ29866
LinkDB
Position
1:2059093..2062410
AA seq 1105 aa
MGWELEDVEKPFVAQLRALGWTHIEGCLDRPAITGRAHFSEVIQETALRGQLRALNAGPD
GEPWLDDARLSEAVAAITRLGTHKLMEANEKATELLIKGLTVEGLPGWDGGRGQTIRYID
WDAPANNCFTVVNQYRADCPPSSNAAKAFIVADLVLLVNGIPLVVVECKSPSIPEPLAEA
VDQLRRYSNARKAAFEVDDNEGNEALFATTQLLIATCFDEARVACIGATLNHYAQWKTVV
GPDGSGSEIEAAHALDKSTLSEQERLIAGLLTPAHLLDVVKNFMLFMQAGGQTVKAVCRY
QQYRAVNRAISRLRNGQTRLKHGEHDQRGGIIWHTQGSGKSLTMVFLVRKMRTDAQLRRF
KIIVVTDRKDLQGQLSVTATLTGETVEVAESTEGVKALARRRGPALVFATIQKYRNTDTQ
GDASLETDDLPKAAESKATYKAEQKFEVLNEDETILVLVDEAHRTQAGDLHANLLAGLPN
CARIGFTGTPIIMGEKKRTHEIFGEFIDRYTIKEAEADGATVPVLYEGRTAYGAIKDGAS
LDELFEDLFRQHTPEELEAIKQKYATKGHIFDAPALIAAKARDMLRHYVTNILPNGYKAQ
VVAYSRLAAIRYFDALRDARDELLAEAAALSSEDKALDDEDLCRRSPKVQAVVQAWRYRE
TVARLEFAPIISGGNNDDPKWKQWTDGTTQEQLIKRFKKPLFHAKPDKADSLAFLVVKSM
LLTGFDAPIEGVMYLDRPIREAELLQAIARVNRTGFGKRCGIVVDYYGVAQHLKEALAAY
AGEDVEGALASLKDEVPVLRDRHLRVVDLFRQRGIESLDDTEACVDALGSEKLRAEFAVK
LKAFLASLDTVLPRPEGLPYSGDAKRLAYIYARARNRYKDTPVLGKDVGAKVRKLIDDHV
TSLGIDPKIPPIQLTDVEFDAHLSRVASARAKASEMEHAIRSHIRKHIEEDPVLYRKLSE
RLSDILKTLGEQWDEVIVQLQKIIDELRTGKAATADAPGDLPEHCVPFLRTVIDVVCADA
APTDVELLRLKDVTVEVVDLLVQELQSNRNIWSPHKRAAQDELNGQLFDHVMRLRPPLVN
ADKAGVLADRLMEQARANHDKLVQV
NT seq 3318 nt   +upstreamnt  +downstreamnt
atgggctgggaactcgaagacgttgaaaagcctttcgtcgcgcaattgcgagcgcttggc
tggactcacatcgaaggctgcctcgacagacctgcgatcacgggccgcgcccatttcagc
gaagtgatccaggagactgcattgcgcgggcagctgcgcgccctgaatgccggccccgat
ggcgagccctggctggatgatgcgcgcctgtcggaagccgtggcggccatcacccggttg
ggaacgcataagctgatggaggcaaacgaaaaagccaccgaactattgatcaaagggctg
accgtcgaaggtttgccgggatgggacggcgggcgcggccagacgattcgctacatagac
tgggacgcgccggccaacaactgcttcacggtggtcaaccaataccgagccgattgcccg
cccagctccaacgcggctaaggctttcatcgtagccgacctcgtgctgttggtgaacggc
attccgctggtggtggtggagtgcaagagtccatccatcccagaaccactggccgaggcg
gtcgaccaactgcggcgctatagcaacgcgcgtaaggccgccttcgaggtcgacgacaat
gagggtaacgaggcgctgtttgcgaccacacagctcctaatcgcgacatgcttcgacgag
gcccgggtcgcctgtatcggcgctaccctcaaccattacgcgcagtggaagacggtggtc
gggccggacggctcgggcagcgagatcgaagccgcgcatgcattagacaagtccacccta
tcggaacaagaacgtctgatcgcaggcctgctcacacccgcccacctgctggacgtagtg
aagaatttcatgctcttcatgcaggccggtggccagacggtcaaagcggtctgccgctac
cagcaatatcgtgccgtcaaccgcgcgatttcccgcctcaggaatggacaaacccgtcta
aagcatggcgagcatgaccagcgcggcggcatcatctggcacacgcagggctctgggaag
agcctgaccatggtgttcctcgtgcgcaaaatgcgcacggatgcgcagcttcgtcgtttc
aaaattatcgtcgtcaccgaccgtaaggatttgcagggccagttgtcggtcaccgccacg
ctgacgggcgagacggtcgaggtggccgaaagcaccgaaggcgtgaaggcgctggctcgg
cgccgggggccggcgttggtttttgccaccattcagaaataccggaatactgatacgcag
ggcgacgcatctttggagacggacgatcttccgaaggcagcggagtctaaggctacttac
aaagcagaacaaaaattcgaagtgttgaacgaggatgagaccattctcgtgctcgttgac
gaggcgcaccgcacgcaggccggagatctacacgcgaacctgctggcgggattgccaaac
tgcgcccggatcggcttcactggcacgccgatcatcatgggcgaaaaaaagcgtacgcac
gaaatcttcggtgagttcatcgaccgctacacgatcaaggaggccgaggccgatggcgcc
acggtgccagtgttgtacgaggggcggactgcctacggtgcgatcaaggacggcgcaagc
ctagatgagctattcgaggatctatttcgtcaacacacgccggaagagctggaggcaatc
aagcagaaatacgcaaccaagggacatatatttgacgccccggcgttgattgccgctaag
gcgcgcgacatgcttcgtcactatgtgacgaacatcttgcctaacggctacaaagcgcag
gttgttgcctacagccggctggcggcgatccgctatttcgatgcactccgggacgcccga
gacgaactgttggcggaagctgccgcgctgtcttcggaagacaaggcgctcgacgacgag
gatttgtgtcgacgctcgcccaaggtgcaggcggtggttcaggcatggcgttatcgcgaa
acggtagcccgactcgagttcgcgcccattatctccggtggcaacaacgacgatccgaag
tggaagcagtggactgacggcacgacccaggagcagctcatcaagcgctttaagaagccg
ctcttccatgccaagccagacaaggccgattcgcttgccttcttggtggtgaagtcgatg
ttgctcaccggtttcgacgcacccatcgagggagtgatgtatttggaccgtccgattcgg
gaggcggagctgttgcaggccatcgcccgggtcaaccgcacgggcttcggtaagcgttgc
ggcatcgtggtggactactacggggttgcgcagcacctgaaggaggcgcttgccgcctac
gcgggcgaggacgtggagggcgcgctggctagtctgaaagacgaggtgccggtgctgcgc
gaccggcatctgcgcgtagtggacctgttccgccagcgtggcatcgaatcgctagacgat
accgaggcctgcgtcgacgcgctcggtagcgagaagctgcgcgccgaattcgcggtcaag
ttgaaggcttttctcgcatcgctggatacggtgttgccacgtccagagggactaccgtat
tccggggatgcgaagcggctggcctatatctacgccagagcccgcaatcgatacaaggac
acgccggttctaggcaaggacgttggcgccaaggttcgaaaactgatcgatgatcacgtg
acctcgctgggcatcgaccccaagattccaccgattcagctcaccgatgtcgagtttgac
gcccacctgtcgcgtgtggcgagtgcccgcgccaaagcttcggagatggaacatgcgatt
cggtcgcatatccgcaagcacattgaagaagacccagtgctctaccgcaagctctcggaa
cggctgagcgacattctcaaaacactgggagagcaatgggacgaggtcattgtgcaactc
caaaagatcatcgatgaactgcgcaccggcaaggcggctactgctgatgcgcccggcgac
ctacccgagcattgcgtcccatttctcaggacggtaatagacgtagtctgtgccgacgcc
gcaccaacggatgtcgaattgctgcggctgaaggatgtgaccgtggaggtggtggacctg
ctggtgcaggagttgcagagtaaccggaacatttggagtccgcataagcgcgcagcacag
gacgagctcaatggacaattgttcgatcacgtgatgcgactgagaccgccgcttgtcaat
gccgataaggctggggtactggctgatcggttgatggagcaagcccgcgccaaccacgac
aagcttgtgcaggtgtga

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