Burkholderia pseudomallei NCTC 13179: BBK_2109
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Entry
BBK_2109 CDS
T02894
Symbol
pcnB
Name
(GenBank) pcnB: poly(A) polymerase family protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bpk
Burkholderia pseudomallei NCTC 13179
Pathway
bpk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBK_2109 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpk03019
]
BBK_2109 (pcnB)
Enzymes [BR:
bpk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BBK_2109 (pcnB)
Messenger RNA biogenesis [BR:
bpk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BBK_2109 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AGZ28068
LinkDB
All DBs
Position
1:complement(2422705..2424261)
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AA seq
518 aa
AA seq
DB search
MIKKLIRKLLGQDARTAQDAPQDPAEPRSAAPAAPAAPAGRAKPARGAAKKPRNGAPTIV
HADVHGIDPALISKNAIRVTDTLQQAGFRAFIVGGAVRDLLLGIAPKDFDVATDATPTEV
QRLFRRARLIGRRFQIVHVQFGQELIEVSTFRALVDAPQEPPADAAPAKRLKRDELDRRT
HAVDASGRVLRDNVWGEQHEDAARRDFTINAMYYDPASQTVLDYHDGMADMRARLLRMIG
DPATRYREDPVRMLRVVRFAAKLGFDIEEKTREPIKELADLINNVPAARLFDEMLKLLLS
GHALACLKQLRKQGLHHGLLPLLDVVLEQPQGEKFVTLALNNTDARVRAGKPVSPGFLFA
TLLWHDMRQRFEQYSADGEFPVPALHRAMDDVIDMQTEKLAIHKRYSADMREIWGLQLRL
EKRSGRSALRLLEHQRFRAGYDFLLLRCESGELDPAVGQWWTDFIDGDAATREALLTQGG
SRDKSPRKRRRRGGRSRRTADSAEGAEGAARGESDAND
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaaaaactcatccgcaagctgctcgggcaggacgcccgtacggcgcaagacgcg
ccgcaggacccggccgagccgcgctcggccgcgcccgccgcgcccgccgccccggcgggc
cgcgcgaaacccgcgcgcggcgccgcgaagaaaccccgcaacggcgcgccgaccatcgtg
cacgccgacgtgcacgggatcgaccccgcgctcatctcgaaaaacgcgatccgcgtgacc
gacacgctgcagcaagccggctttcgcgcattcatcgtcggcggcgcggtgcgcgacctg
ctgctcggcatcgcgccgaaggatttcgacgtcgcgaccgacgcgacgccaaccgaagtc
cagcgcctgttccgccgcgcgcggctgatcggccggcgcttccagatcgtccacgtgcag
ttcggccaggagctgatcgaggtgtcgacgtttcgcgcgctcgtcgacgcgccgcaggag
ccgcccgccgacgccgcgcccgcgaagcgcctgaagcgcgacgagctcgaccgccgcacg
catgcggtggacgcaagcgggcgcgtgctgcgcgacaacgtgtggggcgagcagcacgag
gacgcggcgcgccgcgatttcacgatcaacgcgatgtactacgatcccgcatcgcagacc
gtgctcgattaccacgacgggatggccgacatgcgcgcgcgcctgctgcgcatgatcggc
gatccggcgacgcgctaccgcgaggatccggtgcggatgctgcgcgtggtgcgcttcgcg
gcgaagctcggcttcgacatcgaggagaagacacgcgagccgatcaaggagctcgccgat
ctgatcaacaacgtgccggccgcgcgcctgttcgacgagatgctcaagctcctgctgtcg
ggccacgcgctcgcgtgcctgaagcagttgcgcaagcaggggctgcaccacgggttgctg
ccgcttctcgacgtcgtgctcgagcagccgcagggcgagaagttcgtcacgctcgcgctg
aacaacaccgacgcgcgcgtgcgcgcgggcaagccggtgtcgcccggcttcctgttcgcg
acgctgctgtggcacgacatgcgccagcgcttcgagcagtattcggccgacggcgagttc
ccggtgcccgcgctgcatcgcgcgatggacgacgtgatcgacatgcagaccgagaagctc
gcgatccacaagcgctattcggccgacatgcgcgagatctgggggttgcagttgcgcctc
gagaaacgcagcggccgcagcgcgctgcggctgctggaacaccaaagattcagagcgggg
tatgatttcctcctgttacgctgcgaatccggcgagctcgatccggccgtcggacagtgg
tggacggatttcatcgacggcgacgccgcaacgcgcgaggcgctcctcacgcagggcggc
agtcgggacaagtcgccccgcaagcggcgccgccgcggcgggcgcagccgccggacggcc
gacagcgccgagggcgcggaaggcgccgcgcgcggcgagtccgacgcgaacgactga
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