Burkholderia pseudomallei NCTC 13179: BBK_2607
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Entry
BBK_2607 CDS
T02894
Name
(GenBank) FAD binding domain of DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bpk
Burkholderia pseudomallei NCTC 13179
Brite
KEGG Orthology (KO) [BR:
bpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpk03400
]
BBK_2607
Enzymes [BR:
bpk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BBK_2607
DNA repair and recombination proteins [BR:
bpk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BBK_2607
Prokaryotic type
BBK_2607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
LPD1
Motif
Other DBs
NCBI-ProteinID:
AGZ27657
LinkDB
All DBs
Position
1:2974206..2975666
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AA seq
486 aa
AA seq
DB search
MSSSISIAPAVVWFRDDLRVSDHPALMRAAESGRPVIGVYVFDERAGGRPLGGAARWWLH
GSLRALGAALAALGGTLALLRGDEHDTIVSFAAALGAGAVYWSRRYALAARAVDNAVQTA
LDAQGIAVETFNASLLFEPGDLVNADGRPYQVFSAYWRAAMRRGVPAPPLGAPRRLNGGA
LPAALARQCVALDALGLEPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSRLGGYAAERDR
PGIASTSRLSPYVRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTQLHH
FPDLPRRNLRHTLDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCA
SFLVKHLLIDWRAGEAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPVAQGRKF
DPDGAYVRRWVPELAGLPPATIHEPWAAPGAQLAAAGVRLGETYPLPIVAHDAARRRALD
AFGAIR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttcatccatctcgattgcgcccgccgtcgtctggtttcgcgacgatctgcgcgtg
tccgatcatcccgcgctcatgcgcgccgccgagtcggggcgccccgtgatcggcgtctac
gtgttcgacgagcgcgccggcgggcggccgctgggcggcgcggcgcgctggtggctgcac
ggctcgttgcgcgcgctcggcgcggcgctcgccgcgctgggcggcacgctcgcgctgctg
cgcggtgacgagcacgatacgatcgtttcgttcgccgcggcgctcggcgcgggcgccgtc
tactggagccgccgctatgcgcttgccgcgcgcgcggtcgacaacgcggtgcagacggcg
ctcgacgcgcagggcatcgcggtcgagacgttcaacgcgagcctgctgttcgagccgggc
gacctcgtcaacgcggacggccgcccgtatcaggtgttcagcgcgtactggcgcgcggcg
atgcgacgcggcgtgccggcaccgccgctcggcgcgccgcggcgcctgaacggcggcgcg
ctgccggcggcgctcgcgcggcagtgcgtggcgctcgacgcgctcgggctcgagccgacg
ggcccggactgggcgggcggcctgcgcgacgcatggcgtttcggcgaggacgccgcgcac
cgtcggctgcgcgccttcgtcgacagccggctcggcggctatgcggccgagcgcgaccgg
ccgggcatcgcgtcgacgagccggctgtcgccgtacgtgcgcttcggcaacctgtcggcg
cggcagctctggcatgcggccgccgacgcgtacgcgcacggcgcggcgacccaggcggac
ctcgacaagtttctgagcgagctcggctggcgggagttcggttggacccagttgcaccac
tttccggacctgccgcgccgcaacctgcgccacacgctcgacggcatgccgtggcgcgac
gatcccgccgcgcttgccgcatggcggcgcggcgccacgggctatccgttcgtcgacgcc
ggcatgcgcgagctctgggcgacgggctggatgcacaaccgcgtgcggatggtatgcgct
tcgtttctcgtcaagcacttgctgatcgactggcgggcgggcgaggcgtggttctgggac
acgctcgtcgacgcggacgcggcgtcgaacgccgcgaactggcagtgggtcgcgggctgc
ggcgcggatgccgcgccgtatttccggatcttcaatccggtcgcgcagggccggaagttc
gatccggacggcgcctatgtgcggcgctgggtgcccgagctggccggcctgccgcccgcg
acgatccacgagccgtgggcggcgcccggcgcgcagctcgccgcggcgggcgtgcggctc
ggcgagacttatccgctgccgatcgtcgcgcacgacgccgcgcgccggcgagcgctcgac
gcattcggggcaatcagatga
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