Burkholderia pseudomallei NCTC 13179: BBK_2642
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Entry
BBK_2642 CDS
T02894
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bpk
Burkholderia pseudomallei NCTC 13179
Pathway
bpk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBK_2642 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpk03400
]
BBK_2642 (xth)
Enzymes [BR:
bpk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BBK_2642 (xth)
DNA repair and recombination proteins [BR:
bpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BBK_2642 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AGZ28134
LinkDB
All DBs
Position
1:complement(3018822..3019598)
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AA seq
258 aa
AA seq
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MRIATWNVNSLNVRKQHVLDWLAQSDVDVLCLQELKIPDEKFPREALEAAGYRSWFAGQK
TYNGVAILARASLPFDETDIVRNIPGFEDAQQRLIAATIDGVRIVSAYFPNGQALDSDKF
VYKMQWLDALQAWLKDELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFA
QLVALGFVDAFRRFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTVDRV
PRTWEQPSDHTPVVAQLG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgccacctggaacgtcaactccctgaacgtgcgcaagcagcacgtgctcgac
tggctcgcgcagagcgacgtcgacgtgctgtgccttcaggagctcaagatccccgacgag
aagtttccgcgcgaagcgctcgaagcggccggctaccgcagttggttcgcgggccagaaa
acctacaacggcgtcgcgatcctcgcgcgcgcgagcctgccgttcgacgagacggatatc
gttcgcaacatccccggcttcgaggacgcgcagcagcgcctgatcgccgcgacgatcgac
ggcgtgcggatcgtgtccgcgtacttcccgaacggccaggcgctcgactcggacaagttc
gtctacaagatgcaatggctcgacgcgctgcaggcatggctgaaggacgagctgcaacgc
tacccgaagctcgcgctgctcggcgactacaacatcgcgcccgaagatcgcgacgtgcac
gatccggcgaaatgggaaggccagaatctggtgtcgccgcaggagcgcgcgcatttcgcg
cagctcgtcgcgctcggcttcgtcgacgcgttccgacgcttcgagcaacccgagaagacc
ttcacgtggtgggattaccggatgctcgcgttccgccgcaacgccgggctgcggatcgat
cacatcctgctgtcgcccgcgctcgccgaaacctgcacgagctgcaccgtcgaccgtgtg
ccgcgcacgtgggagcagccgtccgaccacacgcccgtcgtcgcgcagctcggctga
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