Burkholderia pseudomallei NCTC 13179: BBK_2679
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Entry
BBK_2679 CDS
T02894
Symbol
recJ
Name
(GenBank) recJ: single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bpk
Burkholderia pseudomallei NCTC 13179
Pathway
bpk03410
Base excision repair
bpk03430
Mismatch repair
bpk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBK_2679 (recJ)
03430 Mismatch repair
BBK_2679 (recJ)
03440 Homologous recombination
BBK_2679 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpk03400
]
BBK_2679 (recJ)
DNA repair and recombination proteins [BR:
bpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BBK_2679 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BBK_2679 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BBK_2679 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
KfrA_N
Motif
Other DBs
NCBI-ProteinID:
AGZ29783
LinkDB
All DBs
Position
1:complement(3067436..3069130)
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AA seq
564 aa
AA seq
DB search
MTRIVTRSAVPAALDALARHGLHPVLARLYAARGIASPADVETALSRLVPPAQLKGCAQA
AALLADALEAGRKMLVVADYDCDGATACAVAVRGLRMFGAKIDYLVPNRFEYGYGLTPEI
VELAAARKPDLLITVDNGIASVDGVAAANARGIDVLVTDHHLPGDTLPAARAIVNPNQPG
CAFPSKHIAGVGVMFYVLLALRAELRARGAFGDARPEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGIAALFRAAARNARSASGFDLGFGLGPRLNAAGRLSDMSL
GIECLTTDDVGRAWELAQQLDAMNRERREIEAGMQQQALADLASVDPAEAATITLFNPEW
HQGVIGIVAGRLKERFHRPAFTFAHADDGGARVKGSGRSIPGFHLRDAIDLISKREPDLI
VTFGGHAMAAGVTLETANVPRFAAAFETVAREWLSDDALARVIETDGDLEDAYFTPQVVE
LLDAAVWGQGFPAPLFSGEFDVASQALVKDKHLKLQLTRGRQRFNAIWFNHAEPLPARAT
LAFRLASDTWNGTTRVQLIVEHAA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcatcgtcacccgctccgccgttcccgccgcgctcgacgcgctcgcccgccac
gggctgcatcccgtgctcgcccgcctctacgcggcgcgcggaatcgcctcgcccgccgac
gtcgaaaccgcgctgtcgcgcctcgtgccgcccgcgcagctcaagggctgcgcgcaggcc
gccgcgctcctcgccgatgcgctcgaggccggccgcaagatgctcgtcgtcgccgattac
gactgcgacggcgcgaccgcctgcgcggttgccgtgcgcggcctgcggatgttcggcgcg
aagatcgattacctcgtgccgaaccgcttcgaatacggctacgggctcacgcccgagatc
gtcgagctcgcggccgcgagaaagcccgacctgctgatcacggtcgacaacggaatcgcg
agcgtcgacggcgtcgcggccgcgaacgcgcgcggcatcgacgtgctcgtcaccgatcac
catctgcccggcgacacgctgcccgccgcgcgcgcgatcgtcaatccgaaccagcccggc
tgcgcgttcccgagcaagcatatcgcgggcgtcggcgtgatgttctacgtgctgcttgcg
ctgcgcgccgagctgcgcgcgcgcggcgcgttcggcgacgcccgccccgagccgcggctc
gacgggctgctcgatctcgtcgcgctcggcacggtggccgacgtcgtgcggctcgacggc
aacaaccgcgtgctcgtcgcgcaaggcctgcagcgcatccgcaacggacggatgcagccc
ggcatcgccgcgctctttcgcgcggccgcgcgcaacgcgcgcagcgcatcgggcttcgat
ctcggcttcggcctcggcccgcgcctgaacgcggcgggccgcctgtcggacatgtcgctc
ggcatcgaatgcctgacgaccgacgacgtgggccgcgcgtgggaactcgcgcagcagctc
gacgcgatgaaccgcgagcggcgcgagatcgaggccggcatgcagcagcaggcgctcgcc
gatctcgcgtcggtcgaccccgccgaggcggccaccatcacgctcttcaaccccgaatgg
caccagggcgtgatcgggatcgtcgcggggcggctcaaggagcgctttcaccggccggcg
ttcacgttcgcgcacgcggacgacggcggcgcgcgcgtgaagggctccggccgctcgatt
cccggcttccatctgcgcgatgcgatcgacctgatctcgaagcgcgaacccgatctgatc
gtcacgttcggcggccacgcgatggccgcgggcgtcacgctcgagaccgcgaacgtgccg
cgcttcgcggccgcgttcgagacggtcgcgcgcgaatggctgtccgacgacgcgctcgcg
cgggtgatcgagacggacggcgatctcgaggatgcctacttcacgccgcaggtggtcgag
ctgctcgatgcggccgtctggggccagggcttcccggcgccgctcttctcgggcgaattc
gacgtcgcctcacaggcgctcgtcaaggacaagcacctgaagctgcaattgacgcgcggc
cgccagcgcttcaacgcgatctggttcaatcacgcggagccgctgcccgcgcgcgcgacc
ctcgcgttccggctcgcgagcgatacgtggaacggcacgacgcgcgtgcaactgatcgtc
gagcacgcggcgtag
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