Burkholderia pseudomallei NCTC 13179: BBK_3036
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Entry
BBK_3036 CDS
T02894
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bpk
Burkholderia pseudomallei NCTC 13179
Brite
KEGG Orthology (KO) [BR:
bpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpk03009
]
BBK_3036 (rimO)
Enzymes [BR:
bpk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BBK_3036 (rimO)
Ribosome biogenesis [BR:
bpk03009
]
Prokaryotic type
ribosomal protein modification factors
BBK_3036 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AGZ28816
LinkDB
All DBs
Position
1:3479016..3480353
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AA seq
445 aa
AA seq
DB search
MVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTCGFIDEAVQESLDAIGEAL
AENGKVIVTGCLGAKKSASGSGLIAEVHPKVLAVTGPHAVGEVMQAVHSHLPKPHDPFVD
LVPAAGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGELVSRPVAEVMLEAENLFKSGVK
ELLVISQDTSAYGVDVKYRTGFWNGRPLKTRMTELVGALGELAAQYGAWVRLHYVYPYPH
VDEIIPMMAQGPLKGHVLPYLDVPFQHAHPEVLKRMKRPANAERVLERVQKWREICPDLT
IRSTFIAGFPGETDAQFEALLDFIRDAELDRVGCFAYSPVEGASANALDGALPDDVREAR
RARFMEVAEEVSAARIARKIGKTLKVLIDEVNAEGGIGRTAADAPEIDGVVYVEPAAKAS
KRYKVGEFVSVKITGADGHDLWGEV
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgctcgggtgcccgaaggccctcgtcgactccgagcagatcatcacgcaactg
cgcgccgaaggctacgaaatctccggcacctatgacggcgcggatctcgtcgtcgtcaac
acttgcggcttcatcgacgaggcggtgcaggaaagcctcgacgcgatcggcgaagcgctc
gccgaaaacggcaaggtgatcgtcaccggctgcctcggcgcgaagaagagcgcgagcggc
tccggcctcatcgcggaagtgcatccgaaggtgctcgccgtcacgggcccgcatgcggtc
ggcgaagtgatgcaggcggtgcacagccatctgccgaagccgcacgatccgttcgtcgac
ctcgtgccggccgcgggcatcaagctcacgccgcgtcactacgcatatctgaagatctcc
gaaggctgcaatcaccgctgctcgttctgcatcatcccgtcgatgcgcggcgagctcgtg
tcgcggcccgtcgccgaggtgatgctcgaagccgagaatctcttcaagtccggcgtgaag
gagctgctcgtgatctcgcaggacacgagcgcgtacggcgtcgacgtcaagtaccgcacg
ggcttctggaacggccggccgctcaagacgcggatgaccgagctcgtcggcgcgctcggc
gagctcgccgcgcagtacggcgcgtgggtgcgcctgcactacgtgtatccgtatccgcac
gtcgacgagatcattccgatgatggcgcaaggcccgctcaagggccatgtgctgccgtat
ctcgacgtgccgttccagcacgcgcatccggaggtgctcaagcgaatgaagcgcccggcg
aacgcggagcgggtgctcgagcgcgtgcagaagtggcgcgagatctgcccggatctgacg
attcgcagcacgttcattgccggctttccgggcgagaccgacgcgcaattcgaggcactc
ctcgatttcatccgcgacgccgagctcgatcgcgtcggctgcttcgcgtattctccggtc
gagggcgcgagcgcgaacgcgctcgacggcgcgctgcccgacgacgtgcgcgaggcgcgc
cgcgcgcgcttcatggaagtcgccgaggaggtgtccgccgcgcgcatcgcgcgcaagatc
ggcaagacgctcaaggtgttgatcgacgaagtcaacgcagaaggcggcatcggccgcacc
gcggccgatgcgcccgagatcgacggcgtcgtctatgtcgagccggcggccaaggcgtcg
aagcgctacaaggtcggcgagttcgtgtccgtgaagatcacgggcgccgacggccacgat
ctgtggggcgaggtctga
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