Burkholderia pseudomallei NCTC 13179: BBK_3061
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Entry
BBK_3061 CDS
T02894
Name
(GenBank) sigma-54 interaction domain protein
Organism
bpk
Burkholderia pseudomallei NCTC 13179
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_4
PAS
AAA_5
AAA_2
Mg_chelatase
Xre-like-HTH
PAS_9
HTH_8
AAA_16
HTH_24
HTH_23
AAA
MLTR_LBD
PAS_8
HTH_28
HTH_3
HTH_36
HTH_AsnC-type
TetR_N
HTH_18
HTH_7
TIP49
Motif
Other DBs
NCBI-ProteinID:
AGZ28702
LinkDB
All DBs
Position
1:3509050..3510399
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AA seq
449 aa
AA seq
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MNQRDAIPIVPISPPDVGVLVSYLEQDPQPMIVLDPSYRILAANAAYQRQFGIAGEAHVG
RRCYQVSHHYDVPCDQAGEHCPMKQAGESRGLNRVLHIHHTPRGPEHVDVELRPIFDARG
AVIAYVERLTTVRSASAKPSGEGLVGGSDAFNAALSALQRVAPSMLPVLLLGESGTGKEL
FARALHEASARAMGPFVVVDCSGIAETLFESELFGYEKGAFTGASARKPGLVETAQGGTL
FLDEIGDVPLSMQVKLLRLIESGTFRRVGGVEALCADFRLVAATHKPLKAMIGDGRFRPD
LYYRISAYPISLPAVRERPGDMPLLVDSILRRIAALGPVAGQRFVVAPDALARLEAYAWP
GNIRELRNVLDRACLLTDDGVIRVEHLPDEVAGGARIEPGAPAKLSDDELARIARAFGGT
RRALAERVGMSERTLYRRLRALGIATREA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcgcgacgccattccgatcgttcccatttcgccgcccgacgtgggcgtgctc
gtgtcgtacctcgagcaggatccgcagccgatgatcgtgctcgatccgtcgtaccggatc
ctcgcggcgaacgccgcgtatcagcggcagttcggcatcgccggcgaggcgcacgtcggg
cggcgctgctaccaggtctcgcatcactacgacgtgccgtgcgaccaggcgggcgagcat
tgcccgatgaagcaggcgggcgaatcgcgcggcctgaaccgcgtgctgcacatccatcac
acgccgcgcgggcccgagcacgtcgatgtcgagctgcggccgatcttcgatgcgcgcggc
gcggtgatcgcatacgtcgagcggctgacgaccgtgcgcagcgcgtcggcgaagccgagc
ggcgaggggctcgtcggcggctcggacgcgttcaacgcggcgctgtccgcgttgcagcgg
gtcgcgccttcgatgctgcccgtgctgctgctcggcgaatcgggcacgggcaaggagctg
ttcgcgcgtgcgttgcacgaggcgagcgcgcgtgcgatggggccgttcgtcgtcgtcgac
tgctcggggattgccgagacgctgttcgaaagcgagctgttcggctatgagaaaggcgcg
ttcaccggcgcgagcgcgcgcaagcccggcctcgtcgagaccgcgcagggcggcacgctg
tttctcgacgagatcggcgacgtgccgctgtcgatgcaggtgaagctgctgcgcctcatc
gaatcggggacgttccggcgggtgggcggcgtcgaggcgctgtgcgcggatttccgcctc
gtcgcggcgacccacaaaccgttgaaggcgatgatcggcgacggccgcttccggccggat
ctgtactaccggatcagcgcgtatccgatttcgctgcccgcggtgcgcgagcgcccgggc
gacatgccgctcctcgtcgactcgatcctgcgccggatcgcggcgctcgggccggttgcc
gggcagcgtttcgtcgtggcgcccgatgcgctcgcgcggctcgaggcgtacgcgtggccg
ggcaatatccgcgagctgcgcaacgtgctcgatcgcgcgtgcctgctcaccgacgacggc
gtgatccgcgtcgagcacctgcccgacgaggtggcgggcggcgcgcgcatcgagccgggc
gcgccggcgaagctgtccgacgacgagctcgcgcgaatcgcgcgcgcgttcggcggcacg
cggcgcgcgctcgccgagcgtgtcgggatgagcgagcgcacgctgtaccggcggttgcgc
gcgctggggatcgcgacgcgggaggcgtga
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