Burkholderia pseudomallei NCTC 13179: BBK_3413
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Entry
BBK_3413 CDS
T02894
Symbol
truB
Name
(GenBank) truB: tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bpk
Burkholderia pseudomallei NCTC 13179
Brite
KEGG Orthology (KO) [BR:
bpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpk03016
]
BBK_3413 (truB)
Enzymes [BR:
bpk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BBK_3413 (truB)
Transfer RNA biogenesis [BR:
bpk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BBK_3413 (truB)
Prokaryotic type
BBK_3413 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
UPF0113
Motif
Other DBs
NCBI-ProteinID:
AGZ29216
LinkDB
All DBs
Position
1:complement(3954822..3955757)
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AA seq
311 aa
AA seq
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MTTVSPRPRMARRALDGVLLLDKPVGLSSNDALMRAKRLYQAKKAGHTGTLDPLASGLLP
LCFGEATKFSQDLLEADKTYEATMRLGVRTTTGDAEGDVLDTRDVSCDEAAVRAALARFV
GEIVQVPPMYSALKRDGKPLYEYARAGQTVEREGRTVTIRALALVSCALPDVTFRVTCSK
GTYVRTLAEDIGEALGCGAHLTMLRRTGVGPLTLEHAVTLDALDAATQDERDARLAPVDA
LLSTFPCVKLDAALATRFLHGQRLKLSELAARPDAAEGGRVRVYDADDRLLGVARASEGV
LAPERLVVTGA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgtttcgccccgcccccggatggcccgccgcgcgctcgacggcgtgctgctg
ctcgacaagccggtcggcctgtcgagcaacgacgcgctgatgcgcgcgaaacgcctgtat
caggcgaagaaggcgggccacacgggcacgctcgatccgctcgcgtcgggactgctgccg
ctttgcttcggcgaagcgacgaagttctcgcaggacctgctcgaagccgacaagacctat
gaagcgacgatgcggctcggcgtgcgcacgacgacgggcgacgccgaaggcgacgtgctc
gacacgcgcgacgtgagctgcgacgaagcggcggtccgcgcggcgctcgcgcgcttcgtc
ggcgagatcgtgcaagtgccgccgatgtactcggcgctcaagcgcgacggcaagccgctt
tacgaatacgcgcgcgccggccagacggtcgagcgcgaagggcgcacggtgacgatccgc
gcgctcgcgctcgtgtcgtgcgcgttgcccgacgtcacgtttcgcgtgacgtgcagcaag
ggcacgtacgtgcgcacgctcgccgaggatatcggcgaagcgctcggttgcggcgcgcat
ctgacgatgttgcggcgcaccggggtcggcccgctgacgctcgagcacgcggtgacgctc
gatgcgctcgacgccgcgacgcaggacgagcgcgacgcgcggctcgcgcccgtcgatgca
ttgctgtcgacgtttccgtgcgtgaagctcgatgcggcgctcgcgacgcgctttctgcac
ggccagcggctgaagctctccgagcttgcggcgcggcccgacgcggccgaaggtgggcgc
gtgcgcgtctacgatgccgatgaccggctgctcggcgtcgcgcgcgcgtcggaaggcgtg
ctcgcgccggagcggctcgtcgtgacgggcgcgtga
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