Burkholderia pseudomallei NCTC 13179: BBK_5013
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Entry
BBK_5013 CDS
T02894
Name
(GenBank) uracil-DNA glycosylase, 4 family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bpk
Burkholderia pseudomallei NCTC 13179
Pathway
bpk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBK_5013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpk03400
]
BBK_5013
Enzymes [BR:
bpk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BBK_5013
DNA repair and recombination proteins [BR:
bpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBK_5013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AGZ32296
LinkDB
All DBs
Position
2:1849463..1850119
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AA seq
218 aa
AA seq
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MARDARAAHSSRRRRAADDDDAPQTLDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPG
NQEDREGAPFVGPAGRVLERALAAAGLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEI
DACRYWLERELDALEPRVVVALGAIALKAVLDDRHARLQPAMGVVQSAGGRYVIATYHPS
FVLRVPDPDARKRAYAAIVEACRIAHELAQRTDGAPRP
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgacgctcgcgccgcgcattcgtcgcgccgccgccgtgcggcggacgacgac
gacgcgccgcagacgctcgatgcgtgccgccgttgcgggctctgggagcacgcgacgcag
gcggtgcccggcgcgggcccgccgcgcgcggcgatcatgctcgtcggcgaacagccgggc
aatcaggaagaccgcgagggcgcgccgttcgtcggcccggccgggcgcgtgctcgagcgc
gcgctcgcggcggcggggctcgaccgcgcgagcgtctacgtgacgaacgcggtcaagcac
ttcaaatgggcgccgcgcggcaagcggcggatgcacaagacgcccgcgcagcaggaaatc
gatgcgtgccggtattggctcgagcgcgaactggacgcgctcgagccgcgcgtcgtcgtc
gcgctcggggccatcgcgctgaaggccgtgctcgacgatcgccacgcgcggctgcagccc
gcaatgggcgtcgtgcaatcggcgggcggccgctatgtgatcgcaacctaccacccgtcg
ttcgtgctgcgcgtgcccgatcccgacgcgcgcaagcgcgcgtacgcggcgatcgtcgaa
gcgtgccgcatcgcgcacgagctcgcgcagcgcacggacggcgcaccccggccctga
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