Burkholderia pseudomallei NCTC 13179: BBK_5428
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Entry
BBK_5428 CDS
T02894
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bpk
Burkholderia pseudomallei NCTC 13179
Pathway
bpk00100
Steroid biosynthesis
bpk00909
Sesquiterpenoid and triterpenoid biosynthesis
bpk01100
Metabolic pathways
bpk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bpk00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
BBK_5428
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
BBK_5428
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bpk01006
]
BBK_5428
Enzymes [BR:
bpk01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
BBK_5428
Prenyltransferases [BR:
bpk01006
]
Terpene biosynthesis
Squalene/phytoene synthase
BBK_5428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
T4SS
Motif
Other DBs
NCBI-ProteinID:
AGZ30603
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All DBs
Position
2:2373380..2374429
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AA seq
349 aa
AA seq
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MGNSTRAFLLGPLLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQR
LELLLSLRAQINGAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAA
VRGVVTTLTEGMEFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLP
GLLTEREDTMSERGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPG
ASLRARPLMHALVRTTLAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDA
WLDPARASKVRRGDVYRILAYSLPLAMSNGALRAWLDRLIADVEARLIA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgggcaattccacccgggcctttctgctgggccccctgctgaagggcgtgtcgcgctcc
ttctatctgacgttgcgcgtgctgccgcaaggcatgcgcgacccgatcggccttgcgtat
ctgctcgcgcgcgcggccgacacgatcgccgacacgtcgctgatcccgcccgctcagcgg
ctcgaactgctgctgtcgctgcgcgcgcagatcaacggcgcgcccgatccgcacgcgctc
gcgcggatcgcgggcgaggtcgcggggcagcaggcgcagacggacgagaagacgctgctc
gaatcgctcggccccgcgctcgcggtgctgtcgcaattgagcgcgcccgatcgcgccgcg
gtgcgcggcgtcgtcaccacgctcaccgaagggatggaattcgatttgcgcacgttcccg
gacgaatcgtcgggccgcatcgtcgcgctgcgggaatggccggcgctcgatcgctatacg
tatctcgttgccggctgcgtcggcgaattctggacgaagatgacgtgcgcgcatctgccc
gggctgctgaccgagcgcgaggacacgatgagcgagcgcggcatccgcttcggcaaggcg
ctgcagatgaccaacgtgctgcgcgactgcggcagggacctgcggatcggccgctgctat
ctgccgcaggcgatgctggacgaatacgggctgcgcgcggaggatctgctggggccgggc
gcttcgctgcgcgcacggccgctgatgcatgcgctcgtgcgcacgacgctcgcgcatttt
cacgcgggcatcgattatacgttcgcgattccgcgccgcgcgccgcgcctgcggcttgcc
tgtttctggccgatcgcgatcggcctgcggacgctcgcgctgctcgcgtcgaacgacgcg
tggctcgatccggcgcgcgcgtcgaaggtgcggcgcggcgacgtctaccggatcctcgcg
tattcgctgccgctcgcgatgtcgaacggcgcgctgcgcgcgtggctcgaccgcctgatc
gcggacgtcgaggcgcggctcatcgcgtga
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