Burkholderia pseudomallei 1106a: BURPS1106A_0101
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Entry
BURPS1106A_0101 CDS
T00480
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bpl
Burkholderia pseudomallei 1106a
Brite
KEGG Orthology (KO) [BR:
bpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpl03032
]
BURPS1106A_0101 (gyrB)
03400 DNA repair and recombination proteins [BR:
bpl03400
]
BURPS1106A_0101 (gyrB)
Enzymes [BR:
bpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BURPS1106A_0101 (gyrB)
DNA replication proteins [BR:
bpl03032
]
Prokaryotic type
DNA Topoisomerases
BURPS1106A_0101 (gyrB)
DNA repair and recombination proteins [BR:
bpl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BURPS1106A_0101 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ABN89755
UniProt:
A3NPW5
LinkDB
All DBs
Position
I:complement(97271..99739)
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AA seq
822 aa
AA seq
DB search
MTEQHNSQPENSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEAL
AGYCNDIHVTIHADNSISVTDNGRGIPTDVKLNDKHEPKRSAAEIVMTELHAGGKFDQNS
YKVSGGLHGVGVSCVNALSSWLRLIVRRDGKKHFMEFHRGIAQNRVLEERDGEQVSPMQV
IGETENRGTEVHFMADPTIFGTVEYHYDILAKRIRELSFLNNGVRIRLTDLRSGKEDDFA
FAGGVKGFVEYINKTKSVLHPTIFHINGEKDSVGVEVAMQWNDSYNENVLCFTNNIPQRD
GGTHLTGLRAAMTRVINKYIADNEIAKKAKVETTGDDMREGLSCVLSVKVPEPKFSSQTK
DKLVSSEVRAPVEEVVAKALEEFLLETPNDAKIICGKIVEAARARDAARKAREMTRRKGV
LDGVGLPGKLADCQEKDPAKSEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKAR
YDKLLSSEQIVTLVTALGCGIGKDDYNLDKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQ
MPEMIERGYVYIAQPPLYKVKAGRDERYLKDDTELNAHMLRLALQGSELVPTENGTPISG
DALGELARSYLLARGVVERLSRLYDPAALEAVMDGVAIDLSSEASTEASAKALAAMLSDD
SKTEVRVVPAYDAVREQRSLRVERTHHGNVRVSVIDEEFQHTADYQQLVNTANTFKGLIG
AGAAIKRGERSSNVTDFKEAMKWLMADAERNLSKQRYKGLGEMNPEQLWETTMDPAVRRL
LRVQIEDAIAADGIFTTLMGDEVEPRRAFIENNALRAGNIDV
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacagcataattcgcagcccgaaaatagctacggcgcgtcgtcgatccagatc
ctcgaaggcctggaagcggtgcgcaagcgacccgggatgtacatcggcgacacgtcggac
ggcaccggtctgcatcacctcgtgttcgaggtgctcgacaactcgatcgacgaggcgctc
gccggctactgcaacgacatccatgtgaccatacacgcggacaattcgatctccgtgacc
gacaacggccgcggcatcccgaccgacgtcaagctcaacgacaagcacgagccgaagcgc
tcggccgccgaaatcgtgatgaccgagctgcatgcgggcggcaagttcgaccagaacagc
tacaaggtgtcgggcggcctgcacggcgtcggcgtgtcgtgcgtgaacgcgctctcgagc
tggctgcgcctcatcgtgcgccgcgatggcaagaagcacttcatggaattccatcgcggc
atcgcgcagaaccgcgtgctcgaggagcgcgacggcgagcaggtctcgccgatgcaggtg
atcggcgagaccgagaaccgcggcaccgaagtgcacttcatggccgatccgacgatcttc
ggcaccgtcgaataccactacgacattctcgcgaagcgcatccgcgagctctcgttcctg
aacaacggcgtgcgcatccggctgaccgacctgcgctccggcaaggaagacgatttcgcg
ttcgcgggcggcgtgaagggcttcgtcgagtacatcaacaagacgaagagcgtgctgcac
ccgacgatcttccacatcaacggcgagaaggacagcgtgggcgtggaagtagcgatgcag
tggaacgacagctacaacgaaaacgtgctgtgcttcacgaacaacatcccgcagcgcgac
ggcggcacgcacttgaccggcctgcgcgcggctatgacgcgcgtgatcaacaagtacatc
gccgacaacgagatcgcgaagaaggcgaaggtcgagacgaccggcgacgacatgcgcgaa
gggctttcgtgcgtgctctccgtgaaggtgccggagccgaagttcagctcgcaaacgaag
gacaagctggtttcgtccgaagtgcgcgcgccggtggaggaagtggtggcgaaggcgctc
gaggagtttctgctcgaaacgccgaacgacgcgaagatcatctgcggcaagatcgtcgaa
gcggcgcgcgcgcgcgatgccgcgcgcaaggcgcgcgagatgacgcgccgcaagggcgtg
ctcgacggcgtgggcctgccgggcaagctcgcggactgccaggagaaggacccggcgaag
tcggaaatctacattgtcgagggcgactcggcgggcggctcggccaagcaggggcgcgac
cgcaagttccaggcgatcctgccgctgcgcggcaaggtgctgaacgtcgagaaggcgcgc
tacgacaagctgctgtcgtccgagcagatcgtcacgctcgtgaccgcgctcggctgcggg
atcggcaaggacgactacaacctcgacaagctgcgctaccaccggatcatcatcatgacc
gatgcggacgtggacggcgcgcacatccgcacgctgctgctgacgttcttctaccggcag
atgccggagatgatcgagcgcggctacgtgtacatcgcgcagccgccgctttacaaggtg
aaggcgggccgcgacgagcgctacctgaaggacgataccgagctgaacgcgcacatgctg
cgcctcgcgctgcagggctcggagctcgtgccgaccgagaacggcacgccgatctcgggc
gacgcgctcggcgagctcgcgcgctcgtatctgctcgcgcggggcgtggtggagcggttg
agccgcctgtacgacccggccgcgctcgaggcggtcatggacggtgtcgcgatcgatctg
tcgagcgaggcatcgacggaggcgtcggcgaaggcgctggccgccatgctatccgacgat
tcgaagaccgaagtgcgcgtcgtgccggcttacgatgcggtacgcgagcagcgctcgctg
cgcgtggagcgcacgcatcacggcaacgtgcgcgtatcggtgatcgacgaggaattccag
cacacggccgattatcagcagctcgtgaacaccgcgaatacgttcaagggcttgatcggc
gcgggggcggcgatcaagcgcggcgagcggagctcgaacgtgacggacttcaaggaagcg
atgaagtggctgatggccgacgctgagcggaacctgtctaagcagcggtataaggggttg
ggcgagatgaaccccgagcagctgtgggaaacgacgatggacccggcggtgcggcggttg
ctgcgcgtgcagatcgaggatgcgattgcggccgatgggatctttaccaccctcatgggg
gatgaggtcgagccgcgtagggcgtttatcgagaataatgcgctaagggcggggaatatt
gatgtttga
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