Burkholderia pseudomallei 1106a: BURPS1106A_1391
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Entry
BURPS1106A_1391 CDS
T00480
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bpl
Burkholderia pseudomallei 1106a
Pathway
bpl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BURPS1106A_1391 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpl03400
]
BURPS1106A_1391 (recD)
Enzymes [BR:
bpl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BURPS1106A_1391 (recD)
DNA repair and recombination proteins [BR:
bpl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BURPS1106A_1391 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
Helicase_RecD
SLFN-g3_helicase
RecD_N
DEAD
MukB
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ABN88785
UniProt:
A3NTJ3
LinkDB
All DBs
Position
I:1368421..1371093
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AA seq
890 aa
AA seq
DB search
MSVVDERFAWTGGLADRLPEPADFGLALAEGFARRIGMLSRRVGASAAAARWAARAAFAA
SRATAAGHVCVALRALAQRYDEPYDDVRAALAASGVTAFDGIVRGGECPLVVDRDGRLYL
ARYFEYETRLANALVERSRCGGAPAGGADALSPDALGERLVRYFGPQKERGVDWQRVAAL
IALTGRVTIVSGGPGTGKTTTVVGVIACLLDAHPELRIALAAPTGKAAQRMQEALHARAG
SLPAELAARLPRTSCTLHRLLGGGPGGRFAHHRDNPLPYDLVVVDEASMIDVALAAHLLA
ALAPNARLVLLGDKDQLAAVEAGAVFAELSARPAFSPATCATIARALGVGEAEFVAALPD
GFVVQAAGAERVADARAAAADMDAAARGTAGAAAAAARATAAAAARMTTAAAAARGAAPA
PHAGRRGGGRASNRTVDDAQGSLFAFDDDAFGVGTSGGEPGAGAQGAGRRDGGAPSLDGP
HAGHRDGGASPGVAHSRRDAFDARARSGPADVSDLENAARAYAPAGAAGPADSPADASFV
EPAAWIEADELAWLDNAVFSFSEGASANAEADGRRSAAATATDADARTAPPVAREATAPT
PRETARSDGSAVAPLTDCVVWLERNYRFGLDSPIGRLSLAIRRGAVQDALDALSTQDDAA
ARFSDDGGATLSAATVEQLARGFAGYAAALRDALATPEPDALPLFDVLNRFRVLCATRTG
ARGAEEVNARMAAEVRRAVRVPLALGAHWFAGRPVMVTRNDYALGLFNGDIGIALPGARG
ALRVWFRGADGRARAVSPAALPPHDTAFALTVHKSQGSEFDDAALILPASFNRVLSRELV
YTAITRARARVQVIGSRAVLALAIATRTARDSGLAARIADALRARQEGAR
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggtcgacgaacgtttcgcgtggacgggcggcctggcggaccgtctgcccgag
ccggccgatttcgggctcgcgctcgccgaaggcttcgcgcgccggatcgggatgctgtcg
cggcgtgtcggcgcgagcgccgcggccgcgcgctgggcggcacgcgcggcgttcgccgcg
agccgcgcgacggcggcggggcacgtatgcgtcgcgctgcgcgcgctcgcgcagcgctac
gacgagccgtacgacgacgtacgcgcggcgctcgccgcgagcggcgtgaccgcgttcgac
ggcatcgtgcgcggcggcgagtgcccactcgtcgtcgatcgcgatggtcggctgtatctc
gcgcgctacttcgaatacgagacgcggctcgcgaacgcgctcgtcgagcggagccgatgc
ggcggcgcgccggcgggcggcgccgatgcgctctcgcccgacgcgctcggcgagcggctc
gtccgctatttcgggccgcagaaggagcggggcgtcgattggcagcgcgttgcggcgctc
atcgcgctcacgggccgcgtgacgatcgtgagcggcgggccgggcaccggcaagacgacg
acggtcgtcggcgtgatcgcgtgcctgctcgatgcgcatccggagttgcggatcgcgctt
gccgcgcccaccggcaaggccgcgcagcggatgcaggaggcgctgcacgcgcgcgccggc
agcctgccggcggaactcgcggcgcgcctgccgcgcacgtcctgcacgctgcaccggctg
ctgggcggtggcccgggcgggcgcttcgcgcaccaccgcgacaatccgctgccgtacgat
ctcgtcgtcgtcgacgaggcttcgatgatcgacgtcgcgctcgccgcgcatttgctcgcc
gcgctcgcgccgaacgcgcgcctcgtgctgctcggcgacaaggatcagctcgcggccgtc
gaggcgggcgcggtgttcgccgagctgagcgcgcgtcccgcgttcagcccggcgacgtgc
gcgacgatcgcgcgcgcgctcggcgtcggcgaggccgagttcgtggcggcgctgccggac
gggttcgtcgtgcaggcggccggcgcggagcgcgtggcggacgcgcgtgcggcggcggcc
gatatggacgcggccgcgcgcgggacggccggcgccgcggctgcggccgcacgagcgacc
gcggccgcagccgcacgaatgaccacggccgcagccgcggcgaggggggccgcgccggcg
ccgcacgcgggccggcgtggcggcgggcgcgcatcgaatcggaccgtcgacgatgcgcag
ggatcgttgttcgcgttcgacgacgacgcattcggtgtgggcacgtcgggcggcgagccg
ggggccggcgcgcaaggtgccgggaggcgagatggcggggcgccgagcctcgacgggccg
cacgccgggcatcgggacggcggcgcatcgcccggcgtcgcgcacagccggcgcgatgcg
ttcgacgcgcgtgcccggtcgggtccggcggatgtttccgacctggaaaacgccgcgcgc
gcgtacgcgccggcgggcgcagccggcccggccgattcgccggcggacgcgtctttcgtc
gagccggccgcctggatcgaagcggacgaactcgcgtggctcgacaacgcggtcttttcg
ttctccgaaggcgcttcggcgaatgccgaagccgacgggcggcgaagcgccgcggcgacg
gcgaccgacgcggacgcgcgcaccgcgccgccggttgcgcgggaagcgacggcgccgacg
ccgcgcgagaccgcgcgatcggacggttccgccgtcgcgccgctgaccgactgcgtcgtc
tggcttgaacgcaactatcgcttcggccttgattcgccgatcggccggctgtcgcttgcg
attcgccgcggcgcggtgcaggacgcgctcgacgcgctatcgacgcaagacgacgcggcc
gcgcgttttagcgacgacggcggtgcgacgctgtcggccgcgacggtcgagcagctcgcg
cgaggcttcgccggctatgcggccgcgctgcgcgacgcgctggcgacgcccgaacccgat
gcgctgccgctcttcgacgtgctcaaccgctttcgcgtgctttgcgcgacgcgcacgggc
gcgcgcggcgcggaggaagtcaacgcgcgcatggcggccgaggtgcgccgcgcggtgcgc
gtgccgctcgcgctcggtgcgcactggttcgccggacggcccgtgatggtgacgcgcaac
gattacgcgctcggcctcttcaacggcgacatcggcattgcgctgcccggcgcgcgcggt
gcgctgcgcgtctggtttcgcggcgcggacggccgcgcccgggcggtgtcgcccgccgcg
ctgccgccgcacgacacggcgttcgcgctgaccgtccacaaatcgcagggctcggaattc
gacgacgcggcactgatcctgcccgcgtcgttcaatcgcgtgctgtcgcgcgaactcgtc
tacaccgcgatcacgcgcgcgcgcgcgcgcgtgcaggtgatcggctcgcgcgcggtgctc
gcgctcgcgatcgcgacgcgcacggcgcgcgattccggccttgccgcacgaatcgccgat
gcgctgcgcgcgcggcaggagggcgcgcgatga
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