Burkholderia pseudomallei 1106a: BURPS1106A_2944
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Entry
BURPS1106A_2944 CDS
T00480
Symbol
ihfB
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
bpl
Burkholderia pseudomallei 1106a
Brite
KEGG Orthology (KO) [BR:
bpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpl03032
]
BURPS1106A_2944 (ihfB)
03036 Chromosome and associated proteins [BR:
bpl03036
]
BURPS1106A_2944 (ihfB)
03400 DNA repair and recombination proteins [BR:
bpl03400
]
BURPS1106A_2944 (ihfB)
DNA replication proteins [BR:
bpl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BURPS1106A_2944 (ihfB)
Chromosome and associated proteins [BR:
bpl03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BURPS1106A_2944 (ihfB)
DNA repair and recombination proteins [BR:
bpl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BURPS1106A_2944 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ABN89373
UniProt:
A3NXW8
LinkDB
All DBs
Position
I:complement(2886457..2886780)
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AA seq
107 aa
AA seq
DB search
MTKSELVAQLASRFPQLVLKDADFAVKTMLDAMSDALSKGHRIEIRGFGSFGLNRRPARV
GRNPKSGEKVQVPEKHVPHFKPGKELRERVDGRAGEPLKNDEPEDAQ
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgagttggtcgcccagctggcatcgcgatttccgcaactcgtgttgaag
gatgcggatttcgcggtgaaaacgatgcttgatgcgatgtccgacgcgttgtcgaaaggg
caccgcatcgaaattcgcggcttcggcagctttggtctgaaccgtcgcccggcgcgcgtc
gggcgcaatccgaagtcgggggagaaagtgcaggtgcccgagaagcacgtgccgcacttc
aagcccggcaaggaattgcgcgagcgcgtcgatggccgcgccggcgagccgttgaagaac
gacgagccggaagacgcgcagtga
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