Burkholderia plantarii ATCC 43733: bpln_1g02410
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Entry
bpln_1g02410 CDS
T04139
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bpla
Burkholderia plantarii ATCC 43733
Pathway
bpla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bpln_1g02410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpla03019
]
bpln_1g02410
03400 DNA repair and recombination proteins [BR:
bpla03400
]
bpln_1g02410
Enzymes [BR:
bpla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
bpln_1g02410
Messenger RNA biogenesis [BR:
bpla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
bpln_1g02410
DNA repair and recombination proteins [BR:
bpla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
bpln_1g02410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ALK29072
UniProt:
A0A0B6RXR6
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All DBs
Position
1:308469..310316
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AA seq
615 aa
AA seq
DB search
MSRALEILNEVFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRHEAGQ
GAGIVVSPLIALMQDQVAALTEVGVRAAYLNSTLSGAEAAATERALREGELDLLYVAPER
LMTPRFLDLLERTRIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPYVPRVALTATAD
AITRDEIIHRLALDDARVFVSSFDRPNIRYRIVEKDNARSQLLDFIRAEHTNADGTTDAG
VVYCLSRRKVEETAEWLKTQGVRALPYHAGMEFEIRQRHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPANAWMAYGLGDVVQQRKMIDESDADD
AHKRVQTGKLDALLGLCETASCRRVRLLGYFGETSQPCGNCDTCLEPPDTWDATREAQMA
LSCVFRAQRASGFNFGASHLIEILRGAKTEKVQQRGHDTLSTFGIGAELSEPEWRAIFRQ
LVAFGYLAVDHGGFGALVLTAASKPVLKGEETVTLRRYVKPKSSRQSSTRSGARADPTAG
MSARERACWERLRAWRAETAKSDGVPAYVIFHDATLAEIARNAPGSIDDLRHIPGIGARK
LDRFGDEILEVVEAP
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcgcgctcgaaatcctgaacgaagttttcggttatccggcctttcgcggccag
cagggcgagatcgtcgaacacgtcgcggcgggtggcgactgtctcgtgctgatgcccacc
ggcggcggcaagtcgctctgttaccagatcccggcgctggtgcggcacgaggcggggcag
ggcgccggcatcgtcgtgtcgccgctgatcgcgctgatgcaggaccaggtcgccgcgctg
accgaggtcggcgtgcgcgccgcgtacctgaactcgacgctgtccggcgccgaggcggcc
gccaccgagcgcgcgctgcgtgaaggcgagctcgacctgctctacgtggcgcccgaacgg
ctcatgacgccgcgtttcctcgacctgctcgagcgcacgcgcatcgggctgttcgcgatc
gacgaggcgcactgcgtgtcgcaatgggggcatgatttccgccccgaatacatccagctg
tcggttctgcacgagcgctttccgtatgtgccgcgcgtcgcgctgacggccaccgccgac
gcgatcacgcgcgacgagatcatccatcgcctggcgctcgacgatgcgcgcgtgttcgtg
tcgagcttcgaccggccgaacatccgctaccggatcgtcgagaaggacaacgcgcgctcg
cagctgctcgatttcatccgcgccgagcacaccaacgccgacggcacgaccgacgctggc
gtcgtctactgcctgtcgcgccgcaaggtcgaggaaacggccgagtggctcaagacccag
ggggtgcgcgcgctgccctatcacgccgggatggagttcgagatccgccagcgccatcag
gaaatgttccagcgcgaggaagggatcgtgatgtgcgcgacgatcgcgttcgggatgggg
atcgacaagcccgacgtgcgcttcgtggcccacctcgacctgcccaagagcgtcgagggc
tactaccaggaaaccggccgcgcgggccgcgacggcctgccggccaacgcatggatggcc
tacggcctcggcgacgtggtgcagcagcgcaagatgatcgacgagtccgatgccgacgac
gcgcacaagcgcgtgcagaccggcaagctcgacgcgctgctcggcctgtgcgaaaccgcc
tcctgccgccgcgtgcgcctgctcggttatttcggcgagaccagccagccgtgcggcaac
tgcgacacctgcctcgagccgcccgacacctgggacgccacgcgcgaggcgcagatggcg
ctgtcgtgcgtattccgcgcgcagcgcgcgagcggcttcaacttcggcgcgagccacctg
atcgagatcctgcgcggcgcgaagaccgagaaggtccagcaacgcggtcacgacacgctg
agcacgttcggcatcggcgccgagctgtccgagcccgaatggcgcgcgatcttccggcag
ctcgtggcgttcggctacctggccgtcgatcacggcggcttcggcgcgctggtgctgacc
gcggcgagcaagccggtgctgaagggcgaggaaacggtcacgctgcgccgctacgtgaag
ccgaagagttcgcggcaatcgtccacgcgcagcggcgcgcgcgccgatccgacggccggc
atgtcggcccgcgagcgtgcctgctgggagaggctgcgcgcctggcgcgccgagacggcc
aagagcgacggcgtgcccgcctacgtgatcttccacgacgccacgctggccgagatcgcg
cgcaacgcgcccggatcgatcgacgacctgcgccacatccccggcattggcgcgcgcaag
ctcgaccgcttcggcgacgagatcctcgaggtcgtcgaagcgccctga
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