Burkholderia plantarii ATCC 43733: bpln_1g03940
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Entry
bpln_1g03940 CDS
T04139
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bpla
Burkholderia plantarii ATCC 43733
Pathway
bpla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
bpln_1g03940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpla03400
]
bpln_1g03940
Enzymes [BR:
bpla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
bpln_1g03940
DNA repair and recombination proteins [BR:
bpla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
bpln_1g03940
Prokaryotic type
bpln_1g03940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALK29223
LinkDB
All DBs
Position
1:complement(460412..461269)
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AA seq
285 aa
AA seq
DB search
MATRSSSHKTPAAQASLFEAPTAPAAPVAPPAADEIALHAGAGPVPPLPLAAQFHALPEA
WRELLAPFVASDAYAPLCRFVDAERAAGKTIYPADVFRALRLTAPDDVKVVILGQDPYHG
DDRGTPQAHGLAFSVPPAVRPPPSLRNIFKEITANFGHDTPRHGCLDAWARQGVLLLNTV
LTVERGAAASHAKRGWEPCTDTLIRELARRHRGLVFMLWGAHAQAKRALFDAGVHCMLES
PHPSPLSAHRGFLGNRHFALANAYLSEHGRTPIDWRLPDEAVVLA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggccacccgttcctcttcccacaagacgccggcggcgcaggcgtcgctgttcgaggcc
ccgaccgcgccggcggcaccggtggcgccccccgccgccgacgagatcgcgctgcacgcc
ggcgccgggccggtgccgccgctgccgctcgccgcgcagttccacgcgctgccagaggca
tggcgcgagttgctggcgccgttcgtcgcgagcgacgcctacgcgccgctgtgccgtttc
gtcgacgccgagcgcgccgccggcaagacgatctatccggccgacgtgttccgcgcgctg
cgcctgaccgcgcccgacgacgtgaaggtcgtgatcctcggccaggatccctatcacggc
gacgatcgcggcacgccgcaggcgcatggcctcgcgttctcggtgccgcccgcggtgcgc
ccgccgccgtcgctgcgcaacatcttcaaggaaatcaccgccaatttcggccacgacacg
ccgcggcacggctgcctcgatgcgtgggcgcgccagggcgtgctgctgctcaacaccgtg
ctgactgtcgagcgaggcgcggcggcaagccatgcgaagcgcggctgggagccctgcacc
gacacgctgatccgtgagctcgcgcgacgccatcgggggctggtattcatgctgtggggc
gcgcatgcgcaggccaagcgcgcgctgttcgacgccggcgtgcattgcatgctcgaatcg
ccgcatccgtcgccgctgtccgcgcaccgcggctttctcggcaaccggcacttcgcgctc
gccaacgcgtacctgagcgagcatggtcggacgccgatcgactggcgcctgcccgacgag
gcggtggtgctggcctga
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