Burkholderia plantarii ATCC 43733: bpln_1g06170
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Entry
bpln_1g06170 CDS
T04139
Name
(GenBank) putative polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bpla
Burkholderia plantarii ATCC 43733
Pathway
bpla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bpln_1g06170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpla03019
]
bpln_1g06170
Enzymes [BR:
bpla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
bpln_1g06170
Messenger RNA biogenesis [BR:
bpla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
bpln_1g06170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Tad_C
Motif
Other DBs
NCBI-ProteinID:
ALK29443
LinkDB
All DBs
Position
1:complement(713682..715259)
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AA seq
525 aa
AA seq
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MIKKLIRKLLGQDDSAAQDTPGAADAAPPSTGPAAASPAAVAAAKKQAARDAAKVAASRT
EPTLVPAAVHGIDPSLISRNAVRVTDTLQQAGFRAFIVGGAVRDLLLGIAPKDFDVATDA
TPTEVQRLFRRARLIGRRFQIVHVQFGQELIEVSTFRALVDTPADAPEAAPADAAPPRRM
KRDELDRRTHAVDASGRVLRDNVWGEQHEDAARRDFTINAMYYDPATQTVLDYHDGMADV
RARLLRMIGDPATRYREDPVRMLRVVRFAAKLGFDIEPHTREPIQPLADLINNVPAARLF
DEMLKLLLSGHALACLRQLRSEGLHHGLLPLLDVVLEQPQGEKFITLALNNTDARVRAGK
SVSPGFLFATLLWHDMRQRWNQNVANGEFPVPALQRAMDDVLEMQTEKLAIHKRYSADMR
EIWGLQLRLEKRSGRSAMRLLEHQRFRAGYDFLLLRSESGELDPGVAQWWTDFIDGDAAA
REALLTNGAPRDPAAPRKRRRRGGTRNRRPADGTVQEADAPDAQD
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagaaactcatccgcaagctgctcgggcaggacgattccgccgcccaggacacc
cccggcgcggccgacgccgccccgccctccaccggccccgcggccgcctcgccggctgcc
gtcgccgccgcgaagaagcaggccgcgcgcgacgccgcgaaggtcgccgcgagccgcacc
gagccgaccctcgtgccggccgccgtgcatggcatcgacccgtcgctgatctcgcgcaac
gccgtacgcgtgaccgacacgctgcagcaggccggcttccgcgcgttcatcgtcggcggc
gcggtacgcgatctgctgctcggcatcgcgccgaaggatttcgacgtcgccaccgacgcg
acgcccaccgaggtacagcggctgttccgccgcgcgaggctgatcggccgccggttccag
atcgtccacgtgcagttcggccaggagctgatcgaggtctcgacgttccgcgcgctggtg
gacacgccggccgacgcgcccgaggcagcccccgccgacgccgcgccgccgcggcgcatg
aagcgcgacgagctcgaccgccgcacccacgcggtggacgcgagcgggcgggtgctgcgc
gacaacgtctggggcgagcagcacgaggacgcggcgcgccgcgacttcacgatcaacgcg
atgtattacgaccccgcgacgcagaccgtgctcgactaccacgacggcatggccgacgtg
cgcgcacgactgttgcgcatgatcggcgatccggccacgcgctaccgcgaggatccggtg
cggatgctgcgcgtggtgcgcttcgcggccaagctcggcttcgacatcgagccgcacacg
cgcgagccgatccagccgctcgccgacctgatcaacaacgtgcccgccgcgcgcctgttc
gacgagatgctcaagctgctgctctcgggccacgcgctcgcctgcctcaggcagctgcgc
agcgagggcctgcaccacgggctgctgccgctgctcgacgtggtgctggaacagccccag
ggcgagaagttcatcacgctcgcgctcaacaacacggacgcgcgcgtgcgcgccggcaag
tcggtgtcgccgggctttttgttcgcgacgctgctctggcacgacatgcgccagcgctgg
aaccagaacgtcgcgaacggcgagttcccggtgccggcgctgcagcgcgcgatggacgac
gtgctcgagatgcagaccgagaagctcgcgatccacaagcgctactcggccgacatgcgc
gagatctggggcctgcaactgcgcctggaaaagcgctcgggccgcagcgccatgaggctg
ctggaacaccaaaggtttagagcggggtatgatttcctcctcctgcgcagcgagtcgggc
gaactggacccgggcgtcgcgcaatggtggacggatttcatcgacggcgatgccgcggct
cgcgaggcattgctcacgaacggcgccccgcgcgacccggcggcaccgcgcaagcgccgc
cgccgcggcggcacgcgcaaccgcaggccggccgacggcaccgtgcaagaggccgacgcg
ccggacgcgcaggactga
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