Burkholderia plantarii ATCC 43733: bpln_1g06620
Help
Entry
bpln_1g06620 CDS
T04139
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bpla
Burkholderia plantarii ATCC 43733
Pathway
bpla00260
Glycine, serine and threonine metabolism
bpla00460
Cyanoamino acid metabolism
bpla00630
Glyoxylate and dicarboxylate metabolism
bpla00670
One carbon pool by folate
bpla00680
Methane metabolism
bpla01100
Metabolic pathways
bpla01110
Biosynthesis of secondary metabolites
bpla01120
Microbial metabolism in diverse environments
bpla01200
Carbon metabolism
bpla01230
Biosynthesis of amino acids
bpla01240
Biosynthesis of cofactors
bpla04981
Folate transport and metabolism
Module
bpla_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bpla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
bpln_1g06620
09102 Energy metabolism
00680 Methane metabolism
bpln_1g06620
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
bpln_1g06620
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
bpln_1g06620
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
bpln_1g06620
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
bpln_1g06620
Enzymes [BR:
bpla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
bpln_1g06620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ALK29488
UniProt:
A0A0B6RIN2
LinkDB
All DBs
Position
1:774390..775685
Genome browser
AA seq
431 aa
AA seq
DB search
MYSAASVNLYTLNGNRMFDRAQSTIANVDPDLWQAIQQENQRQEDHIELIASENYTSPAV
MAAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRVKALFGADAANVQPNSGSQANQ
GVFFAMLKPGDTIMGMSLAHGGHLTHGSPVNMSGKWFNVVSYGLNEDEDIDYEAAEKLAQ
EHKPKMIVAGASAFALKIDFERLARIAKSVGAYLMVDMAHYAGLIAAGVYPNPVPHADFV
TTTTHKSLRGPRGGVILMRAEYEKPINSAIFPGIQGGPLMHVIAAKAVAFKEAAQPEFKA
YQQQVVENARVLAQTLVKRGLRIVSGRTESHVMLVDLQAKKITGKAAEAALGAAHITVNK
NAIPNDPEKPFVTSGIRLGSPAMTTRGFGAKQAEIVGNLIADVLDNPEDTATIERVRAQV
AELTKQFPVYR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtactcggccgcctcggtcaacctgtacacacttaacggaaaccgtatgtttgacaga
gcccaaagcaccatcgcgaacgttgatcccgacctctggcaggcgatccagcaggaaaac
cagcgccaggaagatcacatcgagctgatcgcctccgagaactacacgagcccggccgtg
atggccgcgcaaggctcgcagctgaccaacaagtacgccgagggctatcccggcaagcgc
tactacggcggttgcgaatacgtggacgtggtcgaacagctggcgatcgaccgcgtcaag
gcgctgttcggcgcggacgcggccaacgtgcagccgaactcgggctcgcaggccaaccag
ggcgtgttcttcgcgatgttgaagcccggcgacacgatcatggggatgagcctcgcgcac
ggcggccacctcacgcacggctcgccggtgaacatgtcgggcaagtggttcaacgtggtg
agctacggcctgaacgaagacgaggacatcgactacgaagcggccgaaaagctggcacag
gaacacaagccgaagatgatcgtggcgggcgcgtcggcgttcgcgctgaagatcgacttc
gagcgtctggcgaggatcgcgaagtcggtgggcgcgtacctgatggtggacatggcgcac
tacgcggggctgatcgcggcgggcgtgtatccgaacccggtgccgcacgcggacttcgtg
acgacgaccacgcacaagagcctgcgcggcccgcgcggcggggtgatcctgatgagggcc
gagtacgagaagccgatcaactcggcgatcttcccggggatccagggtggcccgctgatg
cacgtgatcgcggcgaaggcggtggcgttcaaggaagcggcgcagccggagttcaaggcg
tatcagcagcaggtggtggagaacgcgcgggtgctggcgcagacgctggtcaagcgcggg
ctgcggatcgtgtcgggtcgcacggaaagccacgtgatgctggtggacctgcaggcgaag
aagatcacgggcaaggcggcggaagcggcgctgggcgcggcgcacatcacggtgaacaag
aacgcgattccgaacgatccggagaagccgttcgtgacgagcgggattcgtctgggttcg
ccggcgatgacgacgcgcggcttcggcgcgaagcaagccgagatcgtcggcaacctgatc
gccgacgtgctcgacaatccggaagacacggcgaccatcgagcgcgtgcgcgcgcaggtg
gccgagctgacgaagcagttcccggtctaccgctga
DBGET
integrated database retrieval system