Burkholderia plantarii ATCC 43733: bpln_1g09050
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Entry
bpln_1g09050 CDS
T04139
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bpla
Burkholderia plantarii ATCC 43733
Pathway
bpla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bpla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
bpln_1g09050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpla03019
]
bpln_1g09050
03009 Ribosome biogenesis [BR:
bpla03009
]
bpln_1g09050
Messenger RNA biogenesis [BR:
bpla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
bpln_1g09050
Ribosome biogenesis [BR:
bpla03009
]
Eukaryotic type
Pre-60S particles
RNases
bpln_1g09050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ALK29727
UniProt:
A0A0B6RZR2
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All DBs
Position
1:1052005..1052613
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AA seq
202 aa
AA seq
DB search
MTDTPESAGQSTLVRNELNLVWLDMEMTGLNPDSDRIIEIAVVVTNSTLDKAVEGPVLAI
HQSDETLAKMDAWNQSTHGRSGLIDRVRASTVSEADAAAQIEAFLAQYVSPGKSPMCGNS
ICQDRRFMARWMPELERFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESI
DELKYYREHFLIPAASTAPDGV
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatacccccgaatccgccggccagagcacgctcgtgcgcaacgaactgaacctc
gtctggctcgacatggaaatgacgggtttgaacccggatagcgaccgcatcatcgagatc
gccgtggtcgtcacgaactcgacgctcgacaaggccgtggaaggcccggtgctcgcgatc
caccagagtgacgagacgctcgcgaagatggacgcctggaaccagtccacgcacggccgt
tcgggcctgatcgaccgcgtgcgcgcctcgaccgtgagcgaggccgacgcggccgcgcag
atcgaggcgtttctcgcgcagtacgtctcgccgggcaagtcgccgatgtgcggcaactcg
atctgccaggaccgccgcttcatggcgcgctggatgcccgagctcgaacgcttcttccat
taccggaacctcgacgtcagcacgctgaaggaactttgccgccgctggcagccggccatc
tacaagggcttccagaagcgcgcgatgcatacggcgctggccgacatccacgagtcgatc
gacgagctcaagtactaccgcgagcatttcctgattccggcggcgagcacggcgcccgac
ggcgtctga
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