Burkholderia plantarii ATCC 43733: bpln_1g21680
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Entry
bpln_1g21680 CDS
T04139
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bpla
Burkholderia plantarii ATCC 43733
Pathway
bpla03030
DNA replication
bpla03430
Mismatch repair
bpla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
bpln_1g21680
03430 Mismatch repair
bpln_1g21680
03440 Homologous recombination
bpln_1g21680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpla03032
]
bpln_1g21680
03400 DNA repair and recombination proteins [BR:
bpla03400
]
bpln_1g21680
Enzymes [BR:
bpla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
bpln_1g21680
DNA replication proteins [BR:
bpla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
bpln_1g21680
DNA repair and recombination proteins [BR:
bpla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
bpln_1g21680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_16
AAA_14
AAA_22
AAA_5
AAA_18
AAA_30
TsaE
Mg_chelatase
AAA_2
AAA_assoc_2
DUF3646
Glyco_tranf_2_5
AAA_24
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ALK30940
LinkDB
All DBs
Position
1:complement(2560200..2562824)
Genome browser
AA seq
874 aa
AA seq
DB search
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGVTSQPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVMHLERILGEERVAFEPQALRLLARAAQGSMRDALSLTDQAIAYSANEVTEAAVSGM
LGALDQTYMVRLLDAIASSDGPEILAIADEMALRSLSFSTALQDLAGLLHRIAWAQFAPA
SVLDEWPEAADLRRFADMLSPEQVQLYYQIATVGRGELGLAPDEYAGFTMTLLRMLAFAP
AAGGGAPVPGASPAVAVGGRRAAAPVEATSAASRASGAAAGATPSVPAAAAASKRMPAPM
PPAVVEPVPEPVAAKPAVEPVAYQDVVVSTVSAEAPASADTEKPAESGEAPAEAAAAPAS
EAVPIVADEAAESRVESPDVAPTTGAAPTAEPVAEPEPASLAETPPPVEAAEAADTLLAD
VAARSPATELPEEAVSTASGPAPVAAAVSRPESVEPAAARPAPAEPAEPVAAPAERPAPL
RGAGAAAALDVLRNAGMRVSSDRGRAAPAAKPAAAAKPAAPRVNVPPPRPRAVQPSSRPA
AGSDPSAPPPWDDMPPDDYLPISADDNYGPPPDDGYLPVFDSGPDDVRVALQPAPAPVDT
RPLPPAIALDAIGYAGEWPQLAASLPLKGVAYQLAFNSELTSAEGGVLKLAVPVPQYAEA
AQVVKLKAALAEALGKPVEVAVEVGPARRTAAALDAVERAKRQREAEQEIGADPFVQQLI
RDFGARIVEGSVRPVASDAAAVGPAGQGGAPTLH
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagttctcgcacgcaagtggcgtccgaaggatttcgcttcgctcgtcggc
caggagcacgttgtcagggcgctcacgcatgcgctcgacggcgggcgtttgcatcacgcc
tatctgtttacgggcacgcgcggcgtcggcaagaccacgctgtcgcggatcttcgccaag
gcgctcaattgcgagaccggcgtcacctcgcagccgtgcggcgtttgccgcgcctgccgt
gagatcgacgagggccgtttcgtcgactacgtcgaaatggacgcggcgagcaatcgcggc
gtcgacgaaatggccgcgctgctcgagcgcgccgtctacgcgcccgtcgatgcgcgcttc
aaggtctacatgatcgacgaagtccacatgctgacgaaccacgcgttcaacgcgatgttg
aagacgctggaagagccgccgccgcacgtcaagttcatcctggccaccaccgatccgcag
aagattcccgtcaccgtcctgtcgcgctgcctgcagttcaacctgaagcagatgccggcc
ggccatatcgtgatgcatctcgaacgcatcctcggcgaggaacgcgtcgcgttcgaaccg
caggcgctgcggctgctcgcgcgcgccgcgcagggcagcatgcgcgacgcgctgtcgttg
accgaccaggcgatcgcctattcggccaacgaggtgaccgaggcagccgtgtcgggcatg
ctcggcgcactcgaccagacctacatggtccggctgctcgacgcgatcgcgtcgtccgac
ggccccgagatcctcgcgatcgccgacgagatggccttgcgcagcctgtcgttctcgacc
gcgctgcaggatctggccggcctgctgcaccgcatcgcctgggcgcagttcgcaccggcc
tcggtgctcgacgagtggccggaggcggccgacctgcgccgcttcgccgacatgctgagc
cccgagcaggtgcagctctattaccagatcgcgacggtcggccggggtgaactcggtctc
gcgccagatgaatacgccggcttcacgatgacactgctgcggatgctcgcgttcgcgcct
gccgcgggcggtggcgcgccggtgccgggtgcgtcgcccgccgtggccgtgggcggccgt
cgtgccgccgcaccggtggaagcgacgagcgccgcctcgcgtgcgagcggtgccgctgcc
ggtgcgacgccgtcggtgccggcggctgccgcggcatcgaagcggatgccggctccgatg
ccgccggccgtggtcgagccggtgcccgagcccgttgccgcgaagccggctgtggagccg
gtcgcgtatcaagatgtcgttgtatcgaccgtgtcggccgaagcgccggcgagcgccgat
acagagaagcctgctgaatcgggtgaggcgcccgccgaggctgccgctgcaccagcgagc
gaagcggtgccgatcgtggcggacgaggccgccgagtcgcgggttgaatcacccgatgtc
gcgccgacgaccggggctgcgccgaccgccgaaccggtggccgagcccgagccggcgtcg
ctcgccgaaacgccgccccccgtcgaagcggccgaagcagccgacacgttgctcgccgac
gtggcagcgcggtctccggcgacggaattgcccgaagaagcggtttcgacggcatccggg
ccggcgccggttgccgccgcggtgtcgcgtccggaatccgtcgaacccgccgccgcgcga
ccggctccggccgagccggccgaacctgttgcagcaccggccgagcgtcccgccccgttg
cgcggcgcaggcgccgccgccgcgctcgacgtattgcgcaacgccggcatgcgagtctcg
tccgatcgcggccgtgccgcgccggccgcgaagccggcagcggcggccaagcccgccgcg
ccgcgcgtgaacgtgccgccgccgcgcccgcgggcggtgcagccctcgtcccgaccggcc
gccgggtccgatccgtcggcgccgccgccgtgggacgacatgccgcctgacgattacctg
ccgatctcggccgatgacaactacggcccgccgcccgacgacggctacctgcccgtattc
gacagcggtcccgacgatgtgcgcgtcgcgctgcagccggcgcccgcgccggtcgacacg
cgtccgctgccgcccgccatcgcgctcgacgcgatcggctatgccggcgagtggccgcag
ctggccgcgagcctgccgctcaagggtgtcgcgtaccagctcgcgttcaacagcgaactg
acctccgccgagggcggcgtgctgaagctggccgtgccggtgccgcagtacgcggaggcg
gcccaggttgtcaagctgaaggcggcgctcgccgaggcgctcggcaagccggtcgaggtg
gccgtcgaggtcggtcccgcgcgccgcacggcggccgcgctcgacgcggtcgagcgcgcg
aagcgccagcgcgaggccgagcaggaaatcggcgccgatccatttgtccagcaattgatt
cgcgatttcggcgcgcgcatcgtcgagggctcggtgcggcccgtcgcgagcgacgccgcg
gcggtcgggccggccggccaaggcggcgcgccgacgctgcactga
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