Burkholderia plantarii ATCC 43733: bpln_1g27520
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Entry
bpln_1g27520 CDS
T04139
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
bpla
Burkholderia plantarii ATCC 43733
Brite
KEGG Orthology (KO) [BR:
bpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpla03019
]
bpln_1g27520
03009 Ribosome biogenesis [BR:
bpla03009
]
bpln_1g27520
Messenger RNA biogenesis [BR:
bpla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
bpln_1g27520
Ribosome biogenesis [BR:
bpla03009
]
Prokaryotic type
rRNA processing factors
bpln_1g27520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DUF6880
Motif
Other DBs
NCBI-ProteinID:
ALK31518
LinkDB
All DBs
Position
1:3243106..3244575
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AA seq
489 aa
AA seq
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MNEEILINITPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDI
GLERAAFLHVADIWQPRPPGDPHASVPHPPIEKTVFEGQTLMVQVIKDPIGTKGARLSTQ
VSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVIPPEEKGGYIVRTIAEDATAE
ELGADVAYLRKTWTTIVAQAQRLPATSLLYQDLDLAQRVLRDFANDDTSKIQVDSRETFA
RLSTFATEFTPAVSARLHHYTGERPLFDLYSIETEIQRALSRRVDLKSGGYLMIDQTEAM
TTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHREAV
LGELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCSVCMGKGQVKTSRTV
CYDVLREILRESRQFNPREFRVIASQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNLS
QEQYDIVLM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagaaatcctgatcaacatcacgccgcaggaaacgcgggtcgcgctcgtgcag
caaggcgcggtacaggagcttcacgtcgagcgtacgctgtcgcgcgggcgcgtcggcaac
atctatctcggcaaagtagtgcgcgtgctgccgggcatgcagtcggcgttcatcgacatc
ggcctggagcgcgccgcgttcctgcacgtggccgacatctggcagccgcggccgcccggc
gacccgcacgcgagcgtgccgcatccgccgatcgagaagaccgtgttcgaaggccagacg
ctgatggtgcaggtgatcaaggacccgatcggcaccaagggcgcgcggctgtcgacgcag
gtcagcattgccgggcgcacgctcgtctacctgccgcaggagccgcacatcggcatctcg
cagaagatcgagagcgaggccgagcgcgaggccgtgcgcgcgcggctgaccgccgtgatt
ccgcccgaggagaaaggcggctacatcgtgcggaccatcgccgaggacgccacggccgag
gagctcggcgccgacgtcgcctacctgcgcaagacctggaccaccatcgtcgcgcaggcg
cagcggctgccggccaccagcctgctctatcaggacctcgacctcgcgcagcgcgtgctg
cgcgacttcgccaacgacgacaccagcaagatccaggtcgattcgcgcgagaccttcgcg
cggctctcgaccttcgccaccgagttcacgccggccgtcagcgcgcgcctgcaccactac
accggcgagcggccgctattcgacctctacagcatcgagaccgagatccagcgcgcgctg
tcgcggcgcgtggacctgaagtcgggcggctacctgatgatcgaccagaccgaggcgatg
acgacgatcgacgtcaacaccggcggttacgtcggcgcgcgcaacttcgacgacacgatc
ttcaagaccaacctggaagccgcgcatacgatcgcgcgacagctgcggctgcgcaatctg
ggcgggatcatcatcatcgacttcatcgacatggagaacgccgagcatcgcgaggccgtg
ctcggcgagttgaagaaggcgctctcgcgcgaccgcacgcgcgtgacggtgaacgggttc
tcgcaactggggctggtggagatgacgcgcaagcgcacgcgcgaatcgctcgcccacgtg
ctgtgcgagccctgctcggtctgcatgggcaaggggcaggtgaagacttcgcggacggtt
tgctatgacgtgctgcgcgagattttgcgggagtcgcggcagttcaatccgcgcgagttt
cgcgtgattgcttcgcaacaggtgatcgatttgtttctcgacgaggagtcgcagcatctg
gcgatgctgatcgatttcatcggcaagccggtgtcgctgcaggtggagtcgaatctgagt
caggagcagtacgatatcgtgctgatgtag
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