KEGG   Burkholderia plantarii ATCC 43733: bpln_1g31790
Entry
bpln_1g31790      CDS       T04139                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
bpla  Burkholderia plantarii ATCC 43733
Pathway
bpla03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bpla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    bpln_1g31790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpla03400]
    bpln_1g31790
DNA repair and recombination proteins [BR:bpla03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     bpln_1g31790
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      bpln_1g31790
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 AAA_23 DnaJ_CXXCXGXG nSTAND1 nSTAND3 RsgA_GTPase AAA_21 BCA_ABC_TP_C AAA_25 cobW Viral_helicase1
Other DBs
NCBI-ProteinID: ALK31941
LinkDB
Position
1:3746026..3748896
AA seq 956 aa
MEQIRIRGARTHNLKNVNLDLPRHKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC
PDHEIPLEAQSVSQMVDAALALPEETKLMILAPVIANRKGEHAELFEEMQAQGFVRFRIR
SGGGTANEGVAKIYEVETLPKLKKNDKHTIDVVVDRLKVRPDMKQRLAESFETALRLADG
RAIALEMDTDHEHLFSSKFACPICSYSLQELEPRLFSFNNPMGACPECDGLGQITFFDPK
RVVAHPSLSLAAGAVKGWDKRNQFYFQMLQSLAAFYEFDLDLAFEDLPEKVRKILLYGSG
KQTIPFSYINERGRTSIREHVFEGIIPNLERRYRETDSAAVREELAKYQNNQPCPSCHGT
RLRREARFVRVGSGEQARAIYEVSGWPLRDTLAHFGALTLDGAKREIADKVIQEIVARLT
FLNNVGLDYLSLERSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI
GTLKHLRDLGNSVIVVEHDEDMIRTADYVVDMGPGAGEHGGVVIAEGTPKQVQANAASLT
GQYLLGKKTIDYPDERIAPDPERMLRIDDAHGNNLKHVSLELPVGLLTCITGVSGSGKST
LINDTLYHAVARHLYGAAAEPAPYESIEGLEHFDKVINVDQSPIGRTPRSNPATYTGVFT
PIREMFAGVPSAKERGYDPGRFSFNVKGGRCESCQGDGVLKVEMHFLPDVYVPCDVCHGK
RYNRETLEVQYKGKNISEVLDMTVEHAHEFFAAVPVISRKLKTLLDVGLGYIRLGQSATT
LSGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIALLLEVIHRLRDQGNTVVIIE
HNLDVIKTADWVIDLGPEGGAGGGQIIAQGTPETVAKTKASFTGKYLAPLLKRAKK
NT seq 2871 nt   +upstreamnt  +downstreamnt
atggaacagatccgtatccgtggggctcgcacccacaacctgaagaacgtcaatctcgac
ctcccgcgccacaagctgatcgtaatcacgggattgtcgggatcgggcaaatcgtcgttg
gcgttcgataccctttacgcggaagggcagcggcgctacgtcgaaagcctgtccgcctac
gcgcggcagttcctgcagctgatggagaagcccgacgtcgacctgatcgaggggctctcc
ccggcgatttcgatcgaacagaaagcgacctcgcacaacccgcgttcgaccgtcggcacc
gttacggaaatccacgactacctgcgacttttgtacgcacgcgtcggcacgccctattgc
cccgatcacgagatcccgctggaggcgcagagcgtctcgcagatggtggacgcggcgctg
gcgctgccggaggaaaccaagctgatgatcctcgcgcccgtgatcgcgaaccgcaagggc
gagcacgcggaactgttcgaggagatgcaggcgcagggtttcgtgcggttccggatccgc
tcgggcggcggcacggccaacgagggcgtggcgaagatctacgaagtcgagacgctgccg
aaactgaagaagaacgacaagcacacgatcgacgtggtggtggaccgcctcaaggtgcgc
ccggacatgaagcagcggctcgccgaatcgttcgagacggcgctgcgcctggccgacggc
cgcgcgatcgcactcgagatggacaccgaccacgagcacctgttcagctcgaagttcgcc
tgcccgatctgctcgtattcgctgcaggaactcgagccgcggctgttctcgttcaacaac
ccgatgggcgcctgccccgagtgcgacggcctcggccagatcacgttcttcgatccgaag
cgggtggtggcgcacccgtcgctgtcgctcgcggccggcgccgtgaagggctgggacaag
cgcaaccagttctacttccagatgctgcagagcctcgcggcgttctatgagttcgacctc
gacctggccttcgaggacctgccggagaaggtccgcaagatcctgctgtacggctcgggc
aagcagaccatcccgttctcgtacatcaacgagcgcggccgcacctcgatccgcgagcac
gtgttcgaagggatcatcccgaacctggagcggcgctaccgcgagaccgactcggccgcg
gtgcgcgaggaactcgcgaagtaccagaacaaccagccctgcccgtcctgccacggcacc
cggctgcgccgcgaggcgcgcttcgtgcgcgtgggcagcggcgagcaggcgcgcgcgatc
tacgaagtcagcggctggccgctgcgcgacacgctcgcccacttcggcgcgctgacgctc
gacggcgccaagcgcgagatcgccgacaaggtgatccaggagatcgtcgcgcggctgacc
ttcctcaacaacgtcgggctcgactacctctcgctcgaacgcagcgcggaaacgctctcg
ggcggcgaggcgcagcgcatccggctcgcctcgcagatcggctcgggcctgaccggcgtg
atgtacgtgctcgacgaaccatccatcggcctgcaccagcgcgacaacgaccggctgatc
ggcacgctcaagcacctgcgcgacctcggcaactcggtgatcgtggtcgagcacgacgag
gacatgatccgcaccgccgactacgtggtggacatgggtccgggcgccggcgagcacggc
ggggtggtgatcgccgagggcacgccgaagcaggtgcaggccaacgcggcatcgctgacg
ggccagtacctgctcggcaagaagaccatcgactacccggacgaacgcatcgcgccggac
ccggagcgcatgctgcgcatcgacgacgcgcacggcaacaacctgaagcacgtctcgctc
gaactgccggtcggcctcttgacctgcatcaccggcgtgtcgggctcgggcaagtcgacg
ctgatcaacgacacgctctatcacgcggtggcgcgccacctgtacggcgcggcggccgag
ccggcgccctacgagtcgatcgaggggctcgagcacttcgacaaggtgatcaacgtcgac
cagtcgccgatcggccgtacgccgcgctcgaacccggccacctacacgggcgtgttcacg
ccgatccgcgagatgttcgcgggcgtgccgagcgcgaaggagcgcggctacgatccgggc
cgcttctcgttcaacgtcaagggcgggcgctgcgaatcgtgccagggcgacggcgtgctg
aaggtggagatgcacttcctgcccgacgtctacgtgccgtgcgacgtctgccacggcaag
cgctacaaccgcgagacgctcgaggtgcagtacaagggcaagaacatcagcgaagtgctc
gacatgacggtcgagcatgcgcacgagttcttcgccgcggtgccggtgatctcgcgcaag
ctcaagacgctgctcgacgtcggtctcggctacatccgcctcggccagtcggccaccacg
ctctcgggcggcgaggcgcagcgcgtcaagctctcgctcgaactgtccaagcgcgacacc
ggccgcacgctctacatcctcgacgagccgaccaccggcctgcacttccacgacatcgcg
ctgctgctggaggtgatccaccggctgcgcgaccagggcaacacggtggtgatcatcgag
cacaacctcgacgtgatcaagaccgccgactgggtgatcgacctcgggccggaaggcggc
gcgggcggcggccagatcatcgcgcagggcacgcccgaaacggtggcgaagaccaaggcc
agcttcaccggcaagtacctcgcgccgctgctcaagcgcgcgaagaagtaa

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