Burkholderia plantarii ATCC 43733: bpln_2g04230
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Entry
bpln_2g04230 CDS
T04139
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bpla
Burkholderia plantarii ATCC 43733
Pathway
bpla00260
Glycine, serine and threonine metabolism
bpla00460
Cyanoamino acid metabolism
bpla00630
Glyoxylate and dicarboxylate metabolism
bpla00670
One carbon pool by folate
bpla00680
Methane metabolism
bpla01100
Metabolic pathways
bpla01110
Biosynthesis of secondary metabolites
bpla01120
Microbial metabolism in diverse environments
bpla01200
Carbon metabolism
bpla01230
Biosynthesis of amino acids
bpla01240
Biosynthesis of cofactors
bpla04981
Folate transport and metabolism
Module
bpla_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bpla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
bpln_2g04230
09102 Energy metabolism
00680 Methane metabolism
bpln_2g04230
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
bpln_2g04230
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
bpln_2g04230
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
bpln_2g04230
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
bpln_2g04230
Enzymes [BR:
bpla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
bpln_2g04230
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ALK32688
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All DBs
Position
2:530544..531806
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AA seq
420 aa
AA seq
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MFNYSTSTIEAVDPDLWQAIQQENQRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRVKALFGADAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNEDEDIDYEAAEKLAQEHKPKMIVAGASAFAL
KIDFERLARIAKSVGAYLMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMRAEYEKPINSAIFPGIQGGPLMHVIAAKAVAFKEAAQPEFKAYQQQVVENARVLAQTL
VKRGLRIVSGRTESHVMLVDLQAKKITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGI
RLGSPAMTTRGFGAKQAEIVGNLIADVLDNPEDTATIERVRAQVAELTKQFPVYGGRSEA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgttcaactattccaccagcaccatcgaagcggtcgatccggacctctggcaggcgatc
cagcaggaaaaccagcgccaggaagatcacatcgagctgatcgcctccgagaactacacg
agcccggccgtgatggccgcgcaaggctcgcagctgaccaacaagtacgccgagggctat
cccggcaagcgctactacggcggttgcgaatacgtggacgtggtcgaacagctggcgatc
gaccgcgtcaaggcgctgttcggcgcggacgcggccaacgtgcagccgaactcgggctcg
caggccaaccagggcgtgttcttcgcgatgttgaagcccggcgacacgatcatggggatg
agcctcgcgcacggcggccacctcacgcacggctcgccggtgaacatgtcgggcaagtgg
ttcaacgtggtgagctacggcctgaacgaagacgaggacatcgactacgaagcggccgaa
aagctggcacaggaacacaagccgaagatgatcgtggcgggcgcgtcggcgttcgcgctg
aagatcgacttcgagcgtctggcgaggatcgcgaagtcggtgggcgcgtacctgatggtg
gacatggcgcactacgcggggctgatcgcggcgggcgtgtatccgaacccggtgccgcac
gcggacttcgtgacgacgaccacgcacaagagcctgcgcggcccgcgcggcggggtgatc
ctgatgagggccgagtacgagaagccgatcaactcggcgatcttcccggggatccagggt
ggcccgctgatgcacgtgatcgcggcgaaggcggtggcgttcaaggaagcggcgcagccg
gagttcaaggcgtatcagcagcaggtggtggagaacgcgcgggtgctggcgcagacgctg
gtcaagcgcgggctgcggatcgtgtcgggtcgcacggaaagccacgtgatgctggtggac
ctgcaggcgaagaagatcacgggcaaggcggcggaagcggcgctgggcgcggcgcacatc
acggtgaacaagaacgcgattccgaacgatccggagaagccgttcgtgacgagcgggatt
cgtctgggttcgccggcgatgacgacgcgcggcttcggcgcgaagcaagccgagatcgtc
ggcaacctgatcgccgacgtgctcgacaatccggaagacacggcgaccatcgagcgcgtg
cgcgcgcaggtggccgagctgacgaagcagttcccggtgtacggcggccgttcggaggcc
tga
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