Burkholderia plantarii ATCC 43733: bpln_2g12480
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Entry
bpln_2g12480 CDS
T04139
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bpla
Burkholderia plantarii ATCC 43733
Brite
KEGG Orthology (KO) [BR:
bpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpla03032
]
bpln_2g12480
03400 DNA repair and recombination proteins [BR:
bpla03400
]
bpln_2g12480
Enzymes [BR:
bpla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
bpln_2g12480
DNA replication proteins [BR:
bpla03032
]
Prokaryotic type
DNA Topoisomerases
bpln_2g12480
DNA repair and recombination proteins [BR:
bpla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
bpln_2g12480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ALK33488
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Position
2:complement(1575386..1576540)
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AA seq
384 aa
AA seq
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MATRRREAAGPRPPRVAPKPVTAGAALRHVDDQRPGYTRRRTRAGFAYYDLDGARIRDAD
EIARIDALAIPPAYTDVWICPDPRGHLQATGRDARGRKQYRYHPLWREIRDANKYARMAA
FGHALSKIRARVTRDLAKPGMSRDKVAATVVRLLDTTLVRIGSPEYARDNDSYGLTTLRK
RHLKVRAASVRLCFTGKSGIAHDVRIEDPRVKRILLRCAELPGHDLFQYVDDDGTRHAVG
SADINDYLREASGADFTAKDYRTWAGSVLALTALRRMEWRDATSARKQIVETVRAVSTLL
RNTPAVCRRCYIHPVVLDSFEAGELCLLGPCPVPRGLRSDEARFAALLLLTAKRAKAGAT
ARRPPRGAAAGARASRAAPAALHG
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcggcggcgcgaggcggccgggccgcggcccccccgggtggcgccgaagccg
gtaacggcaggcgccgcgctgcggcacgtcgacgaccagcgccccggctacacgcggcgc
cgcacgcgcgccggattcgcctactacgaccttgacggcgcgcggattcgcgacgccgac
gaaatcgcacgcatcgacgcgctcgcgatcccgcccgcctacaccgacgtctggatctgc
cccgacccacgcggccacctgcaggcgaccggacgcgacgcgcgcggccgcaagcagtat
cgctatcacccgttatggcgcgaaatccgcgacgccaacaagtatgcgcggatggccgcg
ttcggccatgcactgtcgaaaatccgtgcgcgcgtcacgcgcgatctcgcgaagccgggc
atgtcgcgcgacaaggtcgcggccaccgtggtgcgcctgctcgataccacgctggtgcgg
atcggcagccccgaatacgcgcgcgacaacgactcgtacgggctcaccacgctgcgcaag
cgccacctgaaggtgcgcgccgccagcgtgcggctctgcttcaccggcaagagcggcatc
gcgcacgacgtgcgcatcgaagatccacgcgtgaagcgcatcctgctgcgctgcgccgag
ctgcccggccacgacctgtttcagtatgtcgacgacgacggcacgcgccacgcggtcggc
tcggccgacatcaacgattacctgcgcgaggccagcggcgccgatttcaccgccaaggac
taccggacctgggccggcagcgtgctggcgctgactgcgctgcggcgcatggagtggcgc
gacgccaccagcgcgcgcaagcagatcgtcgagacggtgcgcgcggtctcgacgctgctg
cgcaacacgccggcggtctgccggcgctgctatatccatccggtggtgctcgacagcttc
gaggccggcgaactgtgcctgctcggcccctgcccggtgccgcgcggcctgcgcagcgat
gaggcgcggttcgcggcgttgctgctgctcacggcaaagcgcgcaaaggccggcgccacg
gcacgccggccgccgcgcggcgcagcggccggcgcccgcgcctcgcgcgccgcaccggct
gccctgcacggctga
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