Burkholderia pseudomallei 1710b: BURPS1710b_1352
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Entry
BURPS1710b_1352 CDS
T00289
Symbol
rhlE2
Name
(GenBank) putative ATP-dependent RNA helicase 2
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bpm
Burkholderia pseudomallei 1710b
Pathway
bpm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BURPS1710b_1352 (rhlE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpm03019
]
BURPS1710b_1352 (rhlE2)
Enzymes [BR:
bpm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BURPS1710b_1352 (rhlE2)
Messenger RNA biogenesis [BR:
bpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BURPS1710b_1352 (rhlE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ABA47704
UniProt:
Q3JUJ1
LinkDB
All DBs
Position
I:1419139..1420818
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AA seq
559 aa
AA seq
DB search
MPGRWPNRFARDATILPFLPALLPDEASRAARMASSAGGALRRAAASCSFRSGLRRLSRE
RAGRAGCPAAPFERNATMSDSVAKPVDATFDQFGLAAEILKAIAEQGYTTPTPIQAKAIP
VVLSGRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQV
AANVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQ
ILVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVA
RSNAAASTVTQIVYDVAEGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQIERDGII
AAAIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVH
RIGRTGRAGASGDALSLCSPNERKQLADIEKLIKRTLSLETLALDLPRHRHDDRGGRRER
DRDERRGAPAGRRSAGGERTHHPRREAPIDDFFLKPYVPSPSANQPDEAKPVQPEKKAPK
QPLAALLGGFGMPRKTSSS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcccggccgttggccgaaccgtttcgcgagggatgctacaatattgccctttctgccg
gcgctcctgccggacgaagcctcgcgcgcggcccggatggcctcaagcgccggcggcgcc
ctgcggcgcgccgcggcttcatgttcattccgaagtgggttgcgccgtctgtctcgcgag
cgagcaggccgtgctggatgtcccgccgcgccttttgagcgaaacgccaccatgtccgat
tctgttgccaagcctgtcgacgcgacgttcgatcaattcggccttgccgccgagatcctg
aaggcgattgccgagcagggctatacgacgccgacgccgatccaggcgaaggcgattccc
gtcgtgctgtccggccgcgacgtgatgggcgccgcgcagaccggcaccggcaagaccgcg
agtttctcgctgccgatcatccagcggctgctgccgcaggcgaacacgagcgcgtcgccc
gcgcgccacccggtgcgcgcgctgatcctcacgccgacccgcgagcttgccgatcaggtc
gccgcgaacgtgcacgcgtatgcgaagcacacgccgctgcgcagcgcggtcgtgttcggc
ggcgtcgacatgaacccgcaaatggccgagctgcgccgcggcgtcgagatcctgatcgcg
acgcccgggcgcttgctcgatcacgtccagcagaagaccgcgaatctcggccaggtgcag
atcctcgtgctcgacgaggccgaccggatgctcgacatgggcttcctccccgatctgcag
cgcatcctgaacctgctgccgaaggagcgtcagacgctgcttttctcggcgacgttctcg
cccgagatcaagaagctcgcgtcgacctacctgcgcaatccgcagacgatcgaggtcgcg
cgcagcaacgcggccgcgtcgaccgtcacgcagatcgtctacgacgtcgccgaaggcgac
aagcaggcggccgtcgtcaagctgatccgcgaccgctcgctcaagcaggtgatcgtgttc
tgcaacagcaagatcggcgcgagccgccttgcgcgccagatcgagcgcgacggcatcatc
gcggccgcgattcacggcgaccgctcgcagagcgagcggatgcaggcgctcgacgcgttc
aagcgcggcgagatcgaagcgctcgtcgcgaccgacgtcgccgcgcgcggcctcgacatc
gccgaattgccggccgtcatcaatttcgacctgccgttcaacgcggaagactacgtgcac
cggatcggccgcacggggcgtgcgggcgcgtcgggcgacgcgctgtcgctgtgcagcccg
aacgagcgcaagcagctcgccgacatcgagaaactgatcaagcggacgctgtcgctcgaa
acgctcgcgctcgatctgccgcgccatcgccacgacgatcggggcggccgccgcgagcgc
gaccgcgacgagcgccgcggcgcgccggccggccgccgttcggcgggcggcgagcgcacg
catcatccgcgccgcgaagcgccgatcgacgattttttcctgaagccgtacgtgccgtcg
ccgtccgcgaaccagccggacgaggcgaagcccgtgcagccggagaagaaggcgccgaag
cagccgctcgccgcgctcctgggcggattcgggatgccgcgcaagacgtcgtcgtcgtga
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