Burkholderia pseudomallei 1710b: BURPS1710b_1355
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Entry
BURPS1710b_1355 CDS
T00289
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit, form 1
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bpm
Burkholderia pseudomallei 1710b
Pathway
bpm03030
DNA replication
bpm03430
Mismatch repair
bpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BURPS1710b_1355 (dnaE)
03430 Mismatch repair
BURPS1710b_1355 (dnaE)
03440 Homologous recombination
BURPS1710b_1355 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpm03032
]
BURPS1710b_1355 (dnaE)
03400 DNA repair and recombination proteins [BR:
bpm03400
]
BURPS1710b_1355 (dnaE)
Enzymes [BR:
bpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BURPS1710b_1355 (dnaE)
DNA replication proteins [BR:
bpm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BURPS1710b_1355 (dnaE)
DNA repair and recombination proteins [BR:
bpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BURPS1710b_1355 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Motif
Other DBs
NCBI-ProteinID:
ABA49377
UniProt:
Q3JUI9
LinkDB
All DBs
Position
I:1422263..1426024
Genome browser
AA seq
1253 aa
AA seq
DB search
MGCAGSHGARRFGARLRAPARRAGIARMARGAALAGHVERRLLRIGRHDRAAREARDVGC
RRELRVERGTVIEHEAVAVVMGTADFLEILEDPALELIDVLDADVLHVDRRLLAADAARA
ERHDRLALEVRAVRLDHGGKLAEFVDPVIERAIEGPHVDFERIARVEHHDGAARVVVPLV
EPRFERARVDGRRAAELRLDRRLLHRDDLALQAHEHPAKRLRIGQALLERQVRELALEER
IVADVIDERVGRLAWARDEQIDAFGREQDRAAQPERVAARGDERPPLLDRIERDETVGGE
IDGGHEVRTVRRLRPGGEAARLGGGARGERLGASGRKREKRGKAVLSRKPRGFFAVGRTA
DVFGARRGAVASAPARRRVAAGPGAGESRAARLRRRGRRRVERRAHRRVVLRVADAFAAA
GHAISKRGETRARSADADVAASPRTGRRRPEPVIEPDDPNPRSEPATRAAANCRRARLRG
PPPAPVLARRPTRRFFARRERYRVPGPATIAPMSDPRFVHLRVHSEFSIADGIVRLDDIV
KSAAEDGQGALALTDLGNAFGLVRFYKEARDAGIKPIAGCDVWITNHDDRDKPSRLLLLV
KDKRGYLNLCELLSKAWLTNQYRGRAELDASWLEGELAEGLLALSGAQQGDIGLALAAGN
EAAARRHAQRWARVFPGGFYIELQRYGQPGAEAYIQQAVAIAAELKLPVVATHPLQYMTA
DDFTAHEARVCISEGDILANPRRQKRFTTEQFFRTQGDMAALFADLPSALANTVEIAKRC
NLTLELGKPKLPRFPTPDGMSLDDYLVQLSQEGLDKRLVQLYPDEAEREAQRGKYNQRLD
FECGTIKKMGFPGYFLIVADFINWAKNNGVPVGPGRGSGAGSLVAYSLGITDLDPLRYNL
LFERFLNPERVSMPDFDIDFCQHGRDRVIQYVKEKYGADAVSQIATFGTMAAKAAVRDIG
RVLDLGYMFTDGVAKLIPFKPGKHVTIADAMKEEPLLQERYDNEDEVHQLLDLAQRVEGL
TRNVGMHAGGVLIAPGKLTDFCPLYTQGDEGGVVSQYDKDDVEAVGLVKFDFLGLTTLTI
LDWAERYIRRLDPSKENWSLAQVPLDDPTSFQILKKANTVAVFQLESRGMQGMLKDAQPD
RFEDIIALVSLYRPGPMDLIPSFCARKHGREKVDYPDPRVEPVLKETYGIMVYQEQVMQM
AQIIGGYSLGGADLLRRAMGKKKPEEMAKHREIFAEGAAKNGLTREKSDEIFD
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcgcgggctcacacggcgcgcgccggttcggcgcccggctccgcgcgccggcc
cggcgtgccggaatcgcccggatggcacgcggggcagcacttgccgggcacgtagagcgg
cgactgttgcgcatcggccggcacgaccgcgcggcacgcgaagcacgtgacgtcggctgt
cggcgcgagctgcgggttgagcgcggtacggtaatcgaacacgaagcagtcgccgtggta
atgggcaccgccgacttcctcgaaatacttgaggatcccgccctcgagctgatagacgtt
ctcgatgccgacgtccttcatgtggatcgccgccttctcgcagcggatgccgcccgtgca
gaacgacacgatcgtcttgccctcgaggtccgcgcggttcgcctcgatcacggcgggaaa
ctcgctgaatttgtcgatccggtaatcgagcgcgcgatcgaaggtccccacgtcgacttc
gaacgcattgcgcgtgtcgagcatcacgacggggcggcccgcgtcgtcgtgcccctggtc
gagccacgctttgagcgtgcgcgcgtcgacggacggcgcgcggccgagctccggcttgat
cgccggcttcttcatcgtgatgatctcgcgcttcaggcgcacgagcatccggcgaaacgg
ctgcgaatcggacaggctctccttgaacggcaggtccgcgaacttgccctcgaagagcgg
atcgtggcggatgtaatcgacgaacgcgtcggtcgcctcgcgtgggcccgcgatgaacag
attgatgccttcgggcgcgagcaggatcgtgccgcgcagcccgagcgtgttgcagcgcgc
ggcgacgagcggccgccattgctcgatcgaatcgagcgagacgaaacggtaggcggcgag
attgacggtggtcatgaggttcggacggtaaggcggctgcggcccggcggcgaagccgcg
cggctcgggggcggcgcgcgcggcgagcgcctgggcgcaagcggacgaaaacgggaaaaa
cgtggaaaagccgtattatcccgcaaaccgcgcggctttttcgcagtcggccgaacggcc
gacgtgttcggcgcgcgccgcggcgccgtcgcaagcgcgccggcgcgccggcgtgtcgcg
gccgggcccggagccggggagtctcgcgccgcgcggttgcgaaggcgcggtcgtcggcgt
gtcgaacggcgagcccaccgacgtgtcgttctccgcgtggccgatgcgttcgcggccgcc
ggccacgccatctcgaaaaggggcgaaacgagggcgcgaagcgcggatgcggacgttgcc
gcgtcgccgcgaacggggcgccggcggccggaacccgtgatcgaacccgacgatccgaat
ccgcgatcggagccggccacgcgcgccgcggcgaactgccgtcgtgcgcggcttcgcggc
ccgccgcccgcgccggtcttggcccgacggccaacgcggcgattttttgcccgccgcgaa
cggtatcgggttcccgggccggctacaatagcgcccatgtcagatccccgtttcgttcac
ctccgcgtccactccgaattctcgattgccgacggcatcgtgcgtctcgacgatatcgtc
aagtcggcggccgaagacggtcagggcgcgcttgcactgaccgacctcggcaacgcgttc
ggtctcgtccgtttctacaaggaagcccgcgatgcgggcatcaagccgatcgccggctgc
gatgtctggatcaccaaccacgacgatcgcgacaagccgtcgcggctgctgctgctcgtc
aaggacaagcgcggctacctgaacctctgcgagctgctgtcgaaggcgtggctcacgaac
caataccgcggccgcgcggagctcgacgcgagctggctcgaaggcgagctcgccgaaggg
ctgctcgcgctgtcaggcgcgcagcagggcgacatcggcctcgcgctcgcggcgggcaac
gaggcggccgcgcgccgccacgcgcagcgctgggcgcgggtgttcccgggcggtttctat
atcgaattgcagcgctacggccagccgggcgcggaagcgtacatccagcaggcggtggcg
atcgcggcggagctgaagctgcccgtcgtcgcgacgcatccgctgcagtacatgacggcc
gacgatttcaccgcgcacgaggcgcgcgtgtgcatctcggaaggcgacatcctcgcgaat
ccgcgccgccagaaacgcttcacgaccgagcagttcttccgcacgcagggcgacatggcc
gcgctgttcgccgatctgccctcggcgctcgcgaacacggtcgagatcgccaagcgctgc
aacctgacgctcgagctcggcaagccgaagctgccgcggttcccgacgcccgacggcatg
tcgctcgacgactacctcgtgcagttgtcgcaggaagggctcgacaaacgcctcgtgcag
ctctacccggacgaggccgagcgcgaagcgcaacgcgggaagtacaaccagcgtctcgat
ttcgagtgcggcacgatcaagaagatgggctttccgggctacttcctgatcgtcgcggac
ttcatcaactgggcgaagaacaacggcgtgccggtgggccccgggcggggctcgggcgcg
ggctcgctcgtcgcgtattcgctcggcatcaccgacctcgatccgctgcgctacaacctg
ctgttcgagcgcttcctgaacccggagcgggtgtcgatgcccgacttcgacatcgacttc
tgccagcacggccgcgaccgcgtgatccagtacgtgaaggagaagtacggcgcggacgcg
gtgtcgcagatcgccaccttcggcacgatggccgcgaaggcggccgtgcgggatatcggc
cgggtgctcgatctcggctacatgttcaccgacggcgtcgcgaagctgatcccgttcaag
ccgggcaagcacgtgacgatcgccgacgcgatgaaggaagagccgctcctgcaggagcgc
tacgacaacgaggacgaagtccatcagttgctcgatctcgcgcagcgcgtggagggcctc
acgcgcaacgtcgggatgcacgcgggcggcgtgctgatcgcgcccggcaagctgaccgat
ttctgccccctctacacgcagggcgacgaaggcggcgtcgtcagccagtacgacaaggac
gacgtcgaagccgtcggcctcgtgaagttcgactttctcggcctcacgacgctcacgatt
ctcgactgggccgagcgctacattcgccgtctcgatccgagcaaggagaactggtcgctc
gcgcaggtgccgctcgacgatccgacgtcgttccagatcctcaagaaggccaacacggtc
gccgtgttccagctggaaagccgcggcatgcaggggatgctgaaggacgcgcagcccgac
cgcttcgaggacatcatcgcgctcgtgtcgttgtaccggccgggcccgatggacctgatt
ccgagcttctgcgcgcgcaagcacgggcgcgagaaggtcgactatccggatccgcgcgtc
gagcctgtcctgaaagagacctacgggatcatggtctatcaggagcaggtgatgcagatg
gcgcagatcatcggcggctattcgctcggcggcgcggacttgctgcgtcgcgcgatgggc
aagaagaagcccgaggagatggccaagcatcgcgagatcttcgccgagggcgccgcgaag
aacggcctcacgcgcgagaagtccgacgagatcttcgactga
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