Burkholderia pseudomallei 1710b: BURPS1710b_1377
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Entry
BURPS1710b_1377 CDS
T00289
Symbol
cafA
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
bpm
Burkholderia pseudomallei 1710b
Brite
KEGG Orthology (KO) [BR:
bpm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpm03019
]
BURPS1710b_1377 (cafA)
03009 Ribosome biogenesis [BR:
bpm03009
]
BURPS1710b_1377 (cafA)
Messenger RNA biogenesis [BR:
bpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BURPS1710b_1377 (cafA)
Ribosome biogenesis [BR:
bpm03009
]
Prokaryotic type
rRNA processing factors
BURPS1710b_1377 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ABA50376
UniProt:
Q3JUG6
LinkDB
All DBs
Position
I:complement(1450443..1451909)
Genome browser
AA seq
488 aa
AA seq
DB search
MNEEILINITPQETRVALVQQGAVQELHVERTLSRGRVGNVYLGKVVRVLPGMQSAFIDI
GLERAAFLHVADIWQPRAGDAPAAATHQPIEKIVFEGQTLMVQVIKDPIGTKGARLSTQI
SIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVIPSDEKGGYIVRTIAEDATSDE
LAADVAYLRKTWATIVAQGQRVPPTSLLYQDLDLAQRVLRDFANDDTTRIQVDSRETHQR
LVEFAAEFTPAVSPKLHHYTGERPLFDLYNIEAEIQRALSRRVDLKSGGYLMIDQTEAMT
TIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAVL
AELKKALSRDRTRVTVNTFSQLGLVEMTRKRTRESLAHVLCEPCPTCQGKGQVKTSRTVC
YDILREILRESRQFNPREFRVIASQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNLSQ
EQYDIVLM
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagagatcctgatcaacatcacgccgcaggaaacgcgggtcgcgctcgtccaa
caaggcgcggtgcaggagcttcacgtcgagcgcacgctgtcgcgcggacgcgtcggcaac
gtctatctcggcaaggtcgtgcgcgtgctgcccggcatgcagtcggcgttcatcgacatc
gggctcgagcgcgcggcgttcctgcacgtcgccgacatctggcagccgcgcgcgggcgac
gcgcccgccgccgcgacgcaccagccgatcgagaaaatcgtgttcgagggccagacgctg
atggtccaggtgatcaaggacccgatcggcacgaagggcgcgcggctgtcgacgcagatc
agcatcgcggggcgcacgctcgtctacctgccgcaggagccgcacatcggcatctcgcag
aagatcgagagcgaggccgagcgcgaggcggtgcgtgcgcggctgaccgcggtgatcccg
tccgacgagaaaggcggctacatcgtgcgcacgatcgccgaggacgcgacctccgacgag
ctcgccgccgacgtcgcgtacctgcgcaagacgtgggcgacgatcgtcgcgcagggccag
cgcgtgccgccgacgagcctgctgtatcaggatctcgatctcgcgcagcgcgtgctgcgc
gatttcgcgaacgacgacacgacgcgcatccaggtcgattcgcgcgagacacaccagcgg
ctcgtcgagttcgcggccgagttcacgccggccgtcagcccgaagctgcaccactacacc
ggcgagcggccgctgttcgatctgtacaacatcgaagccgaaatccagcgcgcgctgtcg
cgtcgcgtcgatctgaaatcgggcggctacctgatgatcgatcagaccgaggcgatgacg
acgatcgacgtgaacacgggcggctacgtcggcgcgcgcaatttcgacgatacgatcttc
aagacgaatctcgaggcggcgcacacgatcgcgcggcagcttcggctgcgcaatctcggc
gggatcatcatcatcgatttcatcgacatggagaacgccgagcatcgcgacgcggtgctc
gccgagctgaagaaggcgctctcgcgcgaccgcacccgcgtgacggtgaacaccttctcg
cagttggggctcgtcgagatgacgcgcaagcgcacgcgcgaatcgctcgcgcacgtgctg
tgcgagccttgcccgacgtgccagggcaagggccaggtgaagacatcgcgcaccgtgtgc
tacgacatcctgcgcgagatcctgcgcgagtcgcgacaattcaatccgcgcgagtttcgc
gtgatcgcgtcgcagcaggtgatcgacctctttctcgacgaggagtcgcagcatctcgcg
atgctgatcgacttcatcggcaaaccggtgtcgttgcaggtcgagtcgaacctgagccag
gagcagtacgacatcgtcttgatgtga
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