Burkholderia pseudomallei 1710b: BURPS1710b_1520
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Entry
BURPS1710b_1520 CDS
T00289
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bpm
Burkholderia pseudomallei 1710b
Pathway
bpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BURPS1710b_1520 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpm03400
]
BURPS1710b_1520 (recB)
Enzymes [BR:
bpm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BURPS1710b_1520 (recB)
DNA repair and recombination proteins [BR:
bpm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BURPS1710b_1520 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
ABA50772
UniProt:
Q3JU29
LinkDB
All DBs
Position
I:1601225..1607029
Genome browser
AA seq
1934 aa
AA seq
DB search
MAARRRGRRALRDRRDGARNRADLAGRIGRAARARARCGRAAEPGRARAAPHVRRRAHAA
LSRLRDARWRGARFDVAADRGRRGRRSRAARPPRALHRRPRRFRAAHRPRPHAARLGRCI
RRCARALLRFGAGVRRRAVRRARRARRDACRDGGRRGGRGVARRGRARGPRGRARRSGAR
RRAVGRRHVLVAHEPARAAVSHRVPDRDGRRRAAEPRARGRVRPDGRVREARRPPAARRR
AQSVPRSAARRARAPADRIHGPQHPRQRAAAARGARRRIARPSGRRVGRPGRAARRGRRR
APRVRDRASAATVLGRILRAGRRALHVRRVARDACAPARRGRVRAGAPVLRRAAAGRARA
AGRVRRFRALLAPSGAFAAARAARHRTVGRAGGTRRHRAVRARLRGQRRARRARAAAVDR
DGRRGRVRACAARRRREPRGAGRRDGRGAARPCARRARAARGQRAARARRRRDARAVRVR
RRARMARGGRRAVVRRARRGARRGGDARAAAPARRARAADGGGAGDLPLCAAGGARLPRR
VARASRLLRDRPRRAAPHTMVRLRRHVRIRARRRAARAARAARRAVSRRAADAARVFPEE
RVGARIGERIEGGGRVDQRSRRGRGRRRVARARVARREPVARRAVRRARASRVRSARRAS
AEGVMSHVAPSGPSASELDVFACPLDGVNQIEASAGTGKTWNICALYVRLLLEKDLGADE
ILVVTFTKAATAELHERIRARLAQLAHALDTGDGGGDPFIARLFETTLAPGRGLDPQTAA
KRVRRALRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFEMEADDGALRFELAADFWRTR
VEPVAAAYPAFAEWLVEYGAGPAALDAQLARRLKKPLARLRWDGLHAADDGAESAARAHF
DTAAAIWRDERGVLGTLLADAQPSLNQRSHKPEAVSEALDAWARYFEQASAVAALPRAAL
KLTQSALEKATKKGGATPRHAFFDVAQALEAAVAALEAAQRARWLSLVEQWLDAAPAELA
QRKRTRRVVSFDDLLANLYRALDAHPWLRETLRARYPAALIDEFQDTDPLQFAIFDTIFA
PAGPLFLVGDPKQAIYSFRAADLHTYLAARARASARYTLAVNQRSTPAIVDACNRVFGAN
PRAFVLDGLDYEPVRAGSRVRAPLVDATDPLAGAGDFRIWTLPVGDDVLTKRDAQRHAAH
ACAAEIARLMRGAREHAVTLGGEPLAASGIAVLVQTHRQGSLVKRVLAAWGIGSVELAQA
SVFATIDAEQLERVLAAIDAPGDLRRLRSALASDWFGLDAAALWRLEQGDAEQDGIDAAA
GGASGNGGGARAASAGAPAPSPADADAMGWVERFSRYRLLWRERGFAVMWRTLAGELRIA
ERLMAGADGERRVTDVNHLAELTQARASAQPGIAPTLRWLAAQRREGGGDDAQLRLESDR
NLVQIVTVHKSKGLEYAIVFCPFLNDGGLREPAGSGLPDAREYHDESGCAVLHYGCDDEA
AERASREAVREQAAERARLVYVALTRAVYRCYLVAGTYQSSRSTKEARRSVLNWLVAGAG
RDFDAWLKEPPEDAELAERWQALAGGPVTLGALPVPAHREPLAAGHDAQATRAARRATRG
LRDAWRIASFSSLASAIARDESGIARAADDEMRPDHDALAAALGADALEPPDAAAAIAPA
PAAAPRELAGDDILAFPRGAAAGECLHRLLELSNFADASTWPPAALRALHERPVEAELAL
AERLPAMMTRLVADLAATELVPGMRLAALDPARRLTEMEFLFPAPALDFNALRRLLAAHG
YPDVALEAGTLAGFVKGFIDMIVEHDGRFWIVDWKSNHLGTTPEAYGERALDAAMAHHAY
HLQALLYMVALHRYLRVRMHGYDYDAHIAGYLYVFVRGVRPDWRNGGASAGVHARRPARA
LIEALDALMREGDA
NT seq
5805 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcgccgacgcggtcgccgcgcgctacgggatcgacgcgacggcgctcgaaac
cgtgcagacctggctggccgcatcgggcgcgcggcgcgggctcgcgcccgatgcggccga
gccgccgaacccggccgtgcccgcgccgcgccacacgttcgccgacgcgctcacgcggct
ctttctcggctacgcgatgcccgatggcgcggcgcccgtttcgacgtggctgccgatcgc
gggcgccgagggcggcgaagccgagctgctcggccgcctcgcgcgcttcaccgacgacct
cgacggtttcgcgcggcgcatcgcccgcgacctcacgccgcaaggctggggcgatgtatt
cgccgatgcgctcgcgcgcttcttcgattcggggccggcgttcgccgacgcgctgtccgg
cgtgcgcgacgcgctcgacgcgatgcttgccgcgatggcggaaggcgcggcgggcgcggc
gttgcccgccgcggtcgtgcgcgcgggcctcgcggccgcgctcgacgatccggcgcgcgg
cggcgtgccgtggggcggcgtcacgttctcgtcgctcacgagcctgcgcgggctgccgta
tcgcatcgtgtgcctgatcgggatggacgacggcgtgctgccgagcctcgcgcgcgcgga
cgagttcgacctgatggccgtgttcgcgaagctcggcgaccgccagcggcgcgacgacga
gcgcaatctgttcctcgatctgctgctcgccgcgcgcgagcgcctgctgatcgcatacac
gggccgcagcatccgcgacaacgcgccgctgccgcccgcggcgctcgtcgacgaattgct
cgaccatctggccgccgcgtcggccggcccggacgcgccgcccgacgcggtcgacgccgc
gcgccgcgcgttcgtgatcgagcatccgctgcaaccgttctcggccgaatacttcgcgcc
gggcggcgcgctcttcacgtacgacgcgtcgcgcgcgacgcttgcgcgcctgctcgccga
gggcgcgtgcgcgcaggcgcgcccgttcttcgccgcgccgctgccggccgagcccgagca
gccggtcgcgttcgccgatttcgagcgcttctggcgccatccggcgcgttcgctgctgcg
cgcgcggctcggcatcgtactgttggacgcgcaggcggaactcgtcgacaccgagccgtt
cgagctcgattacgcgggcagcgacgcgctcgccgagcgcgtgctgccgctgttgatcga
gacggccgacgcggccgcgttcgagcatgcgctgcgcgtcgccgacgcgagccccgaggt
gccgggcggcgcgacgggcgcggtgcggcgcgaccatgcgctcgacgcgctcgcgcagct
cgcgggcaacgtgcggcgcgcgctcgccgacggcgcgacgcgcgtgccgttcgcgttcga
cgtcgcgcccgcatggcccgcggcgggcgacgcgcggtggttcggcgagcacgacgcggc
gctcgccgcggcggcgacgcgcgagccgctgcgcctgcacggcgcgctcgcgcggctgac
ggcggcggggcaggtgatctaccgctatgcgcggccgggggcgcgcgattacctcgccgc
gtggctcgcgcatctcgtctattgcgcgatcgaccccggcgggccgcgccgcacactatg
gttcggctccggcgacacgttcgaattcgcgcccgtcgccgcgccgctcgagcagctcgc
gccgctcgccgcgctgtttcgcgccgggcggcggatgccgctcgcgtttttcccgaggag
cgcgtgggcgctcgtatcggagagcgaatcgaaggcggcgggcgtgtggatcaacgatcg
cgtcgcgggcgaggccgacgacgcgtcgctcgcgctcgcgtggcgcggcgcgaacccgtc
gctcgacgagccgttcggcgcgctcgcgcatctcgtgttcgatccgctcgtcgagcatct
gcggagggcgtcatgagtcacgtcgcgccatccggcccgtcggcgagcgagctcgacgtg
ttcgcgtgtccgctcgacggtgtgaaccagatcgaggcgtccgcgggcaccggcaagacc
tggaacatctgcgcgctgtacgtgcgcctgctgctcgaaaaggacctcggcgcggacgag
attctcgtcgtcacgttcacgaaggcggcgacggccgagctgcacgaacggattcgcgcg
cgcctcgcgcagctcgcgcacgcgctcgacacgggcgacggcggcggcgatccgttcatc
gcgcgcctgttcgagacgacgctcgcgcccgggcgcgggctcgatccgcaaacggcggcg
aagcgcgtgcgtcgcgcgctgcgcgcattcgaccaggcggcgatccacacgatccacgcg
ttctgccagcgggcgctgcaggaagcgccgttcgcggcggcgatgccgttcgcgttcgag
atggaagcggacgacggcgcgctgcgcttcgagctggccgccgatttctggcgcacgcgt
gtcgagcccgtcgcggcggcctatccggcgttcgccgagtggctcgtcgagtacggcgcg
gggccggcggcgctcgacgcgcagctcgcgcggcggctgaagaagccgctggcgcgactg
cgctgggacggcttgcacgcggccgacgacggcgcggaaagcgccgcgcgcgcgcacttc
gatacggcggccgcgatctggcgcgacgagcgcggcgtgctcggcacgctgctcgccgac
gcgcagccgtcgttgaaccagcgctcgcacaagccggaggcggtgagcgaggcgctcgac
gcgtgggcgcgttatttcgagcaggcgagtgcggtggccgcgttgccgcgcgcggcgctc
aagctcacgcagtccgcgctcgagaaagcgacgaaaaagggcggcgcgacgccgcgccac
gcgttcttcgacgtcgcgcaggcgctcgaggcggctgtcgccgcgctcgaggccgcgcag
cgcgcgcgctggctgtcgctcgtcgagcaatggctcgacgcggcgcccgccgagctcgcg
cagcgcaagcgcacgcgccgcgtcgtatcgttcgacgatctgctcgcgaacctgtatcgc
gcgctcgacgcgcatccgtggttgcgcgagacgctgcgcgcgcgctatccggccgcgctc
atcgacgaattccaggatacggacccgctgcagttcgcgatcttcgatacgatcttcgcg
cccgccggcccgctctttctcgtcggcgatccgaagcaggcgatctacagcttccgcgcg
gcggacctgcacacgtatctcgccgcgcgcgcgcgggcgtccgcgcgctacacgctcgcg
gtgaaccagcgctcgacgcccgcgatcgtcgatgcgtgcaaccgcgtgttcggcgcgaac
ccgcgcgcgttcgtgctcgacgggctcgattacgaaccggtgcgcgcgggctcgcgcgtg
cgcgcgccgcttgtcgacgcgaccgatccgcttgccggcgcgggcgacttccgcatatgg
acgctgcccgtcggcgacgacgtgctgaccaagcgcgacgcgcagcggcacgccgcgcat
gcatgcgcggcggaaatcgcgcggctgatgcggggcgcgcgcgagcacgcggtgacgctc
ggcggcgagccgctcgcggcgtccggcatcgcggtgctcgtgcagacgcaccggcagggc
agtctcgtgaagcgcgtgctggccgcatggggaatcggcagcgtcgagctcgcccaggcg
tcggtattcgcaacgatcgatgccgagcagctcgagcgcgtgctggccgccatcgacgcg
ccgggcgacctgcggcgcctgcgctcggcgctcgcgtccgactggttcgggctcgatgcg
gcggcgctctggcgcctcgagcagggcgatgccgagcaggacggcatcgacgccgccgcg
ggcggcgcgagcggcaacggcggcggcgcgcgcgccgcatcggcgggcgcgcccgcgccg
tcgcccgcggacgccgatgcgatgggctgggtcgagcgcttctcgcgctaccggctcctg
tggcgcgagcgcggcttcgcggtgatgtggcgcacgctcgccggcgagctgcgcatcgcc
gagcggctgatggcgggggcggacggcgagcggcgcgtgaccgacgtcaatcacctcgcc
gagctgacgcaggcgcgcgcgtccgcgcagccgggcatcgcgccgacgctgcgctggctt
gccgcgcagcgccgcgaaggcggtggggacgacgcgcagttgcggctcgaatccgaccgt
aacctcgtgcagatcgtcaccgttcacaagtcgaaggggctcgaatacgcgatcgtgttc
tgtccgttcctgaacgacggcgggctgcgcgagccggccggctccggcctgcccgacgcg
cgcgagtaccacgacgaatcgggctgcgcggtgctgcattacggctgcgacgacgaagcg
gccgagcgcgcgtcgcgcgaggcggtgcgcgagcaggcggccgagcgcgcgcggctcgtc
tacgtcgcgctcacgcgcgccgtctatcggtgctatctggtcgcgggcacctatcagtcg
tcgcgttcgacgaaggaggcgcggcgcagcgtgctgaactggcttgttgcgggcgcgggc
cgcgatttcgatgcgtggctgaaggagccgcccgaagacgcggagctcgccgagcgctgg
caggcgctcgcgggcggcccggtgacgctcggcgcgctgccggtgcccgcgcatcgcgag
ccgctcgcggccgggcacgatgcgcaggcgacgcgagccgcgcgacgtgcgacgcgtggc
ttgcgcgacgcatggcggatcgcgagcttcagctcgctcgcatcggcgatcgcgcgcgat
gagagcggcatcgcgcgcgcggccgacgacgagatgcgccccgatcatgacgcgcttgcc
gccgcgctcggcgcggacgcgctcgagccgccggacgcggccgccgcgatcgcgccggcg
cccgccgccgcgccgcgcgagctcgccggagacgacatcctcgcgttcccgcgcggcgcg
gcggcgggcgaatgcctgcaccggctgctcgagctgagcaatttcgccgatgcgtcgacg
tggccgcccgccgcgctgcgcgcgctgcacgagcgcccggtcgaggcggagctcgcgctg
gccgagcggctgcccgcgatgatgacgcggctcgtcgccgatctcgcggcgacggagctc
gtgccgggcatgcgcctcgcggcactcgatccggcgcggcggctcacggaaatggagttc
ctgtttcccgcgcccgcgctcgatttcaacgcattgcggcgcttgctcgccgcgcacggc
tatccggacgtcgcgctcgaagcgggcacgctggccggattcgtcaaaggattcatcgac
atgatcgtcgagcacgacggccgcttctggatcgtcgactggaaatcgaatcatctcggc
acgacgcccgaagcatacggcgagcgggcgctcgacgccgcgatggcgcatcacgcgtat
cacctgcaggcgctgctctatatggtcgcgctgcatcgctatctgcgcgtgcgcatgcat
ggctacgactacgacgcgcacatcgcgggctatctgtacgtgttcgtgcgcggcgtgcgt
cccgattggcgaaatggcggcgcgagcgccggcgtgcatgcgcggcggcccgcacgcgcg
ctgatcgaggcgctcgacgcgctgatgcgcgagggggatgcatga
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