Burkholderia pseudomallei 1710b: BURPS1710b_1954
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Entry
BURPS1710b_1954 CDS
T00289
Symbol
hfq
Name
(GenBank) Hfq protein
KO
K03666
host factor-I protein
Organism
bpm
Burkholderia pseudomallei 1710b
Pathway
bpm02024
Quorum sensing
bpm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BURPS1710b_1954 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BURPS1710b_1954 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpm03019
]
BURPS1710b_1954 (hfq)
03036 Chromosome and associated proteins [BR:
bpm03036
]
BURPS1710b_1954 (hfq)
Messenger RNA biogenesis [BR:
bpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BURPS1710b_1954 (hfq)
Chromosome and associated proteins [BR:
bpm03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BURPS1710b_1954 (hfq)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hfq
Mucin-like
LSM
Hfq_1
SelB_WH1
EDC3_N
Motif
Other DBs
NCBI-ProteinID:
ABA48126
UniProt:
Q3JSV0
LinkDB
All DBs
Position
I:complement(2126386..2127036)
Genome browser
AA seq
216 aa
AA seq
DB search
MANPAESHPQNDFINAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKR
AISTIQLDTGGSRPGGRGPRAGGAHGGGGRPGGREGGGHGPYGSHGGSREPRGDGGGYGA
REPRGDGGYGSRESRGDGGYGSREPRGDGGYGSREPRGDGGYGAREPREPREPRESYGAP
QEGASTPSGTQERNGNGNGPVIVTRRRRSLGPTDGQ
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcctgcagaatcccatccgcaaaacgacttcatcaatgccgcgcgcaaggaa
cgcaagcgcgtcgaaatttatctcgtcaacggtattcgactgacgggttgcatcgagtcg
ttcgaccagtatctggtgatgctgcgcacgcccgtcggcctgcaaggcatctataaacgc
gccatctcgacgatccagctcgacacgggcggctcccgtccgggcggacgcggcccgcgc
gcgggcggcgcccacggcggcggcggacgccccggcggacgcgaaggcggcggtcatggc
ccgtacggctcgcacggcggctcgcgcgaaccccgcggcgacggcggcggctatggcgct
cgcgaaccgcgtggcgacggcggttatggctcccgcgaatcgcgcggcgacggcggctac
ggctcccgcgaaccgcgtggcgacggcggctacggttcccgcgaaccgcgtggcgacggc
ggctatggcgcgcgcgagccgcgtgaaccgcgcgagccccgcgagtcttacggcgcgccg
caagaaggcgcatcgacgccgtccggcacgcaggaacgcaacggcaacggcaacggcccg
gtgatcgtcacgcgccgtcgccgttcgctcggcccgaccgacggccaataa
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