Burkholderia pseudomallei 1710b: BURPS1710b_2607
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Entry
BURPS1710b_2607 CDS
T00289
Name
(GenBank) phage SPO1 DNA polymerase domain protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bpm
Burkholderia pseudomallei 1710b
Pathway
bpm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BURPS1710b_2607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpm03400
]
BURPS1710b_2607
Enzymes [BR:
bpm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BURPS1710b_2607
DNA repair and recombination proteins [BR:
bpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BURPS1710b_2607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABA50346
UniProt:
Q3JR03
LinkDB
All DBs
Position
I:complement(2891156..2892562)
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AA seq
468 aa
AA seq
DB search
MAWTEAALEELGLAPAWVRRGAARAADVNEAAAHAAGEAAVAAVARGAQPASPDASREPA
RRIARDGGRDGGRDGGRDGGQNGGQNGGQNGASGDAGSASPNDAAHAMARVAGAEASAAA
AVADERAALARQAGDGRGQTRQAAAESGARAAADAPAPAAAPASRTRDATIARGASPDEP
GVAGVVGVADEPSVAGGARRARTSGGGADVPASALDWTDAAEATRPAAAPAPAALTGGDA
GAAASDEDMSWFDLEPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKR
TNTVFGVGDEHADWMLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANV
IKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIASMRGRV
HQYEGVPVIVTYHPAYLLRSLQDKAKAWSDLCLANDTYRSAAPAADPP
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcatggactgaagcggcgctcgaagaactggggctcgcgcccgcgtgggtgcggcgc
ggcgcggcgcgcgctgcggacgtgaacgaggcggccgcgcacgcggccggagaagccgcg
gtcgcggcggttgcgcgaggagcgcagccggcgtcgccggatgcgtcgcgcgagccggcg
cgtcggatcgcgcgcgatggtgggcgcgacggcgggcgcgacggcgggcgcgacggcggg
caaaacggcgggcaaaacggcgggcaaaacggcgcgagtggcgacgcgggatcggcgtcg
ccgaacgacgcggcgcatgcgatggcgcgtgtcgcgggcgcggaagcgagcgcagccgcc
gccgtcgccgacgaacgcgcggcgcttgcgcggcaggccggcgacgggcgcggacagacg
cggcaagcggcggccgaatccggcgcgcgggcggcggcggatgcgcccgcgccggccgcg
gcgcccgcatcgcggacgcgggatgcgacgattgcgcgcggggcttcgccggacgagccg
ggcgtggcaggcgtggtgggcgtggcggacgagccgagcgtggcgggcggcgcacgccgc
gcgcggacgagcggcggcggcgcggacgtgccggcgagcgcgcttgactggacggatgcg
gccgaggcaacgcgtccggcggcggcgcccgcgccggccgcgctcaccggtggcgatgcc
ggcgcggcggcgtccgacgaggacatgtcgtggttcgatctcgaaccggtgcacgagccc
gtgctgccggacgttgccgcacggcccgccgccactacgccgtccgtcgccgagctcggc
tgggacgaactgcgcgcgcgcgtcgccgactgcgcgcgctgccgcctctgcgaaaagcgc
acgaacacggtgttcggtgtcggtgacgagcacgccgactggatgctcgtcggcgaggcg
cccggcgagaacgaggacaagcaaggcgagccgttcgtcggccaggcgggcaagctgctc
gacaacatgctgcgcgcgctggcgctcaagcgcggcgagaacgtctacatcgcgaacgtg
atcaagtgccggccgcccggcaaccgcaatccggagcccgacgaggtcgcgcgctgcgag
ccgtatctgcagcggcaggtcgcgctcgtgaagccgaagctgatcgtcgcgctcggccgc
ttcgccgcgcagacgctgctcaagacggacggaagcatcgcttcgatgcgcgggcgcgtg
catcagtacgaaggcgtgcccgtgatcgtcacgtaccatccggcgtatctgctgcgcagc
ctgcaggacaaggcgaaggcctggtccgatctgtgtttggcgaacgatacctaccggagt
gccgcgcccgccgccgatccgccatga
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