KEGG   Burkholderia pseudomallei 1710b: BURPS1710b_3250
Entry
BURPS1710b_3250   CDS       T00289                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
bpm  Burkholderia pseudomallei 1710b
Pathway
bpm00260  Glycine, serine and threonine metabolism
bpm00460  Cyanoamino acid metabolism
bpm00630  Glyoxylate and dicarboxylate metabolism
bpm00670  One carbon pool by folate
bpm00680  Methane metabolism
bpm01100  Metabolic pathways
bpm01110  Biosynthesis of secondary metabolites
bpm01120  Microbial metabolism in diverse environments
bpm01200  Carbon metabolism
bpm01230  Biosynthesis of amino acids
bpm01240  Biosynthesis of cofactors
bpm04981  Folate transport and metabolism
Module
bpm_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:bpm00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    BURPS1710b_3250 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    BURPS1710b_3250 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BURPS1710b_3250 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    BURPS1710b_3250 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    BURPS1710b_3250 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    BURPS1710b_3250 (glyA)
Enzymes [BR:bpm01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     BURPS1710b_3250 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase Aminotran_5 Cys_Met_Meta_PP OKR_DC_1
Other DBs
NCBI-ProteinID: ABA50641
UniProt: Q3JP81
LinkDB
Position
I:complement(3555517..3556893)
AA seq 458 aa
MLCRWLSRLAFLGIPPPRRAGCAAGCATYPATSVNLYTLNGNRMFDRAQSTIANVDPEIW
QAIQQENVRQEEHIELIASENYTSPAVMAAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQ
LAIDRVKALFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGMSLAHGGHLTHGSPVNMS
GKWFNVVSYGLNEAEDIDYEAAEQLAHEHKPKLIVAGASAFALKIDFERLAKIAKAVGAY
LMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVILMKAEYEKQINSAIFPG
IQGGPLMHVIAAKAVAFKEALSPEFKEYQQKVVENARVLAQTLVKRGLRIVSGRTESHVM
LVDLRAKNITGKAAEAALGNAHITVNKNAIPNDPEKPFVTSGVRLGSPAMTTRGFGPQEA
ELVGNLIADVLEHPEDAATIERVRAQVAELTKRFPVYR
NT seq 1377 nt   +upstreamnt  +downstreamnt
gtgctttgccggtggctgtcccgcctcgcgttcctcggaatccctccgccacgtcgagcc
ggttgcgctgccggctgcgcgacgtatccggccacttcggtcaacctgtacacacttaac
ggaaaccgtatgtttgacagagcccaaagcaccattgcgaacgtcgatcccgagatctgg
caagcgattcagcaggaaaacgtccgtcaggaagagcacatcgagctgatcgcgtcggag
aattacacgagcccggccgtgatggcggcgcaaggctcgcaactgacgaacaagtacgcg
gaaggctatccgggcaagcgctattacggcggctgcgaatacgtggacatcgtcgagcag
ctcgcgatcgatcgcgtgaaggcgctgttcggcgccgaagcggcgaacgtgcagccgaac
tcgggctcgcaggcgaaccagggcgtgttcttcgcgatgctcaagccgggcgacacgatc
atgggcatgagcctcgcgcacggcggccacctcacgcacggctcgccggtgaacatgtcg
ggcaagtggttcaacgtcgtgagctacgggctgaacgaggctgaagacatcgattacgaa
gcggccgagcagctcgcgcacgagcacaagccgaagctgatcgtcgcgggcgcgtcggcg
ttcgcgctgaagatcgatttcgagcgcctcgcgaagatcgccaaggcagtgggcgcgtac
ctgatggtcgacatggcgcactacgcgggcctgatcgcggcgggtgtctatccgaacccg
gtgccgcatgcggatttcgtcacgacgacgacgcacaagagcctgcgcggcccgcgcggc
ggcgtgatcctgatgaaggccgagtacgagaagcagatcaactcggcgatcttcccgggc
atccagggcggaccgctgatgcacgtgatcgccgcgaaggccgtcgcgttcaaggaagcg
ctgtcgccggaattcaaggaataccagcagaaggtggtcgagaacgcccgcgtgctggcg
caaacgctcgtcaagcgcggcctgcgcatcgtgtcgggccgcaccgagagccatgtgatg
ctggtcgacctgcgcgcgaagaacatcacgggcaaggcggcggaagcggcgctcggcaat
gcgcacatcacggtcaacaagaacgcgatcccgaacgatccggagaagcccttcgtgacg
agcggcgtgcgcctgggctcgccggcgatgacgacgcgcggcttcggcccgcaggaagcg
gagctcgtcggcaacctgatcgccgacgtgctcgagcatcccgaagacgcggcgacgatc
gagcgcgtgcgtgcgcaggtcgccgagctgacgaagcgtttcccggtctatcgctga

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