Burkholderia pseudomallei 1710b: BURPS1710b_3494
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Entry
BURPS1710b_3494 CDS
T00289
Name
(GenBank) ribonuclease II (RNB) family protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bpm
Burkholderia pseudomallei 1710b
Brite
KEGG Orthology (KO) [BR:
bpm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpm03016
]
BURPS1710b_3494
Enzymes [BR:
bpm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BURPS1710b_3494
Transfer RNA biogenesis [BR:
bpm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BURPS1710b_3494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
TMEM61
Motif
Other DBs
NCBI-ProteinID:
ABA50627
UniProt:
Q3JNI8
LinkDB
All DBs
Position
I:complement(3809822..3811741)
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AA seq
639 aa
AA seq
DB search
MQQADEAAQQIDLDFLWECAPAEEFAYAALADEYFGASYGPVERAALVLRLHGAPVYFRR
KGRGQYQRAPEEQLKMALAGLERKRQQALVQAGYEEELKAGRLPDAFAGKALGLLTKPDK
NSIEYKALDAAALARGVSPARLMLDCGGIPSARALHEARFLAEYFPHGTGFPAVAVGKLP
EDLPRADVNAFSIDDITTTEIDDAFSVEHLSDGRVRIGVHIAAPALGIVRGDAVDAIARA
RLSTVYMPGDKITMLPDDVVDVFTLKEGDYRPALSLYIIVKRDTQEIVANETRAEYVYVK
SNLRHNTLDELVTEDALAAGTGDYPHKDDIAALWPLAQALFERRQVARAGYGLKREVQRN
TDYNFYVEGEHVSITPRRRGSPLDLIVSELAILANSTWGAFLHDHSVPGIYRTQRAFGMP
SGPKRTRMQTSAAPHEGLGVPQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKQ
KDADLYAVVQGFDDTYAAYADHQRRMEYFWCLRWIKQEGRKQVSATVVKGELVRLDEVPL
LLHVPALGVHARGTRVLLDVMSVDELTIEASVRLVSVLDAPMVSSGEPADEDEDADAADE
TLLDAADESAQGEAEALAEAGGAASGNGESSANGEEQSK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggcggacgaagccgcccaacagatcgatctggatttcctgtgggagtgcgcg
cccgccgaggaattcgcgtatgccgcgctcgccgacgaatatttcggcgcgagctacggc
cccgtcgagcgcgcggcgctcgtgctgcgcctgcacggcgcgcccgtctacttccgccgc
aaggggcgcggccagtatcagcgcgcgcccgaggagcagctgaaaatggcgctggccggg
ctcgagcgcaagcgccagcaggcgctcgtgcaagccggctacgaggaggagctgaaggcg
ggcaggctgcccgacgcgttcgcgggcaaggcgctcggcctgctgacgaagccggacaag
aactcgatcgaatacaaggcgctcgatgcggcggcgctcgcgcgcggcgtgtcgccggcg
cgcctgatgctcgactgcggcggcattccgtcggcgcgcgcgctgcacgaggcgcgcttt
ctcgccgaatacttcccgcacggcacgggctttccggccgtcgcggtcggcaagctgccc
gaggatctgccgcgcgcggacgtcaacgcgttctcgatcgacgacatcacgacgaccgaa
atcgacgacgcgttctccgtcgagcacctgtccgacgggcgcgtgcggatcggcgtgcac
atcgcggcgcccgcgctcggcatcgtgcgcggcgatgcggtcgacgcgatcgcgcgcgcg
cggctgtcgaccgtctacatgccgggcgacaagatcacgatgctgccggacgacgtcgtc
gacgtgttcacgctgaaggagggcgattaccgcccggcgctgtcgctgtacatcatcgtc
aagcgtgacacgcaggaaatcgtcgcgaacgagacgcgcgccgaatacgtctatgtgaag
agcaacctgcggcacaacacgctcgacgagctcgtcaccgaggacgcactcgcggcgggc
acgggcgattatccgcacaaggacgacatcgcggcgctctggccgctcgcgcaggcgctc
ttcgagcgacgccaggtcgcgcgcgcgggctacgggctcaagcgcgaagtgcagcgcaac
accgattacaacttctacgtcgaaggcgagcacgtgtcgatcacgccgcgccggcgcggc
tcgccgctcgatctcatcgtgtccgagctcgcgatcctcgcgaactcgacatggggcgcg
ttcctgcacgatcacagcgtgccgggcatttaccgcacgcagcgcgcgttcggcatgccg
agcgggccgaagcgcacgcgcatgcagacgagcgccgcgccgcacgaggggctcggcgtg
ccgcagtacgcgtggagcacgtcgccgctgcgccgctacgtcgacctcgtcaaccagtgg
caactgctcgcgtgcgtgcagcacggcgtcaccgcgaagctcgccgccccgttcaagcag
aaggatgcggatctgtacgcggtcgtgcagggtttcgacgacacgtacgccgcgtacgcc
gaccaccagcgccggatggagtatttctggtgcctgcgctggatcaagcaggaaggccgc
aagcaggtgagcgcgaccgtcgtgaagggcgagctcgtgcgcctcgacgaagtgccgctg
ctgctgcacgtgcccgcgctcggcgtgcatgcgcgcggcacgcgggtgctgctcgacgtg
atgtcggtcgacgagctgacgatcgaggcgtcggtacggctcgtgagcgtgctcgatgcg
ccgatggtgtcgagcggcgagccggccgacgaagacgaggacgccgacgcggccgacgag
acgctgctcgacgccgccgacgaatcggcgcaaggcgaagcggaagcgctcgccgaggcg
ggcggcgcggcgagcggcaacggcgaatcgtccgcgaacggcgaggaacaatcgaaatga
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