Burkholderia pseudomallei 1710b: BURPS1710b_3712
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Entry
BURPS1710b_3712 CDS
T00289
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bpm
Burkholderia pseudomallei 1710b
Brite
KEGG Orthology (KO) [BR:
bpm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpm03016
]
BURPS1710b_3712
Enzymes [BR:
bpm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BURPS1710b_3712
Transfer RNA biogenesis [BR:
bpm03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BURPS1710b_3712
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
2H-SAK
Acb1
Motif
Other DBs
NCBI-ProteinID:
ABA48453
UniProt:
Q3JMX7
LinkDB
All DBs
Position
I:complement(4049170..4049730)
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AA seq
186 aa
AA seq
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MTMAGDRLRCFVALTLDRASRDALAALPVAAGARRTPRDQLHVTIAFLGAIERAKSELLG
ARIPALAAAGAVPPVDVERVVCWPSTAHARLVVAELAPQPSLLALGERVGGALRALGLPP
DSRAFKPHVTIARFPRDAHRVTIDGASGAERRSPLALRFETLTLYESVLTRMGAEHRVLA
AAALPA
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggcgggcgaccggttgcgctgcttcgtcgcgctgacgctcgatcgggcgtcg
cgcgacgcgctggccgcgctgcccgtcgccgccggcgcgcggcgcacgccgcgcgaccaa
ctgcacgtgacgatcgcgttcctcggcgcgatcgagcgcgcgaagagcgaactgctcggc
gcgcgcatccccgcgctcgcggcggccggcgcggtgccgcccgtcgacgtcgagcgcgtc
gtctgctggccgagcaccgcgcatgcgcggctcgtcgtcgcggagctcgcgccgcagccg
tcgttgctcgcgctcggcgagcgggtgggcggcgcgctgcgcgcgctcggcctgccgccc
gacagtcgcgcgttcaagccgcacgtgacgatcgcgcggtttcctcgcgacgcgcatcgc
gtgacgattgacggcgcgagcggcgccgagcgccgctcgccgctcgcgttgcggttcgaa
acgctcacgctctacgagagcgtcctcacgcgcatgggcgccgagcatcgggtgctcgcg
gcagcggcgctgccggcataa
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