Burkholderia pseudomallei 1710b: BURPS1710b_A1345
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Entry
BURPS1710b_A1345 CDS
T00289
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bpm
Burkholderia pseudomallei 1710b
Pathway
bpm02020
Two-component system
bpm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bpm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BURPS1710b_A1345 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BURPS1710b_A1345 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpm03021
]
BURPS1710b_A1345 (rpoN)
Transcription machinery [BR:
bpm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BURPS1710b_A1345 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ABA53561
UniProt:
Q3JIV1
LinkDB
All DBs
Position
II:complement(1656150..1657625)
Genome browser
AA seq
491 aa
AA seq
DB search
MSATLALQMRQHLALTPRLQQSLRLLQLSSLEFQQELRQALDTNPFLEDVQSPDDDAAEA
APKPGETPAADANARADDGYAERDEGPFATDASPPAGQDVPLTAELSARGSSRRSDDASD
LEPGDWMTAEPTLHEHLHDALRLCQLTRRDRTLARMIIDALDDDGYLRQALPELAAAADP
LLHPAEQELLVALRLVQSLDQPGIGARTLSECLLLQLDAMPADTPGVECAKEIAAHHLER
LARRETAEMQRRIGCDTHTLRIACTLVRRLDPRPGNQYGSTAGNYVVPDVIVRQVRNDWL
VTINPAVMPRARIHRRYAELFAQSSGSNQSPLGQQLQEARWLIRNAQKRFDTIRRVGECI
VERQRDFFRYGEIALKPLVLRDIADELGLHESTISRATGNKYMSTPHGTFEFKHFFPRKL
EAAGKGACSAAVARVLIRDMIAAEQAIDPLSDVALAQRLAGRGIVLARRTVTKYRQAMKI
PPAELRRRAPL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccacgctcgcgttgcaaatgcgtcaacacctggcgctcacgccgcgcttgcag
cagtcgctgcgtttgctccagctttcgtcgctcgagtttcaacaggaactgcgtcaggcg
ctcgataccaatccgtttctcgaagacgtgcaatcgcccgacgacgatgctgccgaagcc
gcgccgaagccgggcgagacgcccgccgccgacgcaaacgcgagggcggacgacggctac
gccgagcgcgacgagggcccgttcgcgaccgacgcgtcgccgcccgccggccaggacgtg
ccgctgacggcggagctctcggcgcgcggctcgagccggcgctccgacgacgcgtcggat
ctcgagcccggcgactggatgacggccgagccgacgctgcacgagcatctgcacgacgcg
ctgcgcctttgccagctcacccggcgcgaccgcacgctcgcgcgcatgatcatcgacgcg
ctcgacgacgacggctatctgcgccaggcgctgcccgagctcgcggcggcggccgatccg
ctgctgcatccggccgagcaggaactgctcgtcgcgctgcggctcgtgcagtcgctcgat
cagcccggcatcggcgcgcgcacgctgtccgaatgcctgttgctgcagctcgacgcgatg
ccggcggacacgccgggcgtcgaatgcgcgaaggagatcgccgcgcatcacctcgagcgt
ctcgcacgccgcgagacggccgagatgcagcgccgcatcggctgcgacacgcacacgctg
cgcatcgcatgcacgctcgtgcgccggctcgatccgcgccccggcaaccagtacggcagc
acggcgggcaactatgtcgtccccgatgtgatcgtgcggcaggtgcgcaacgactggctc
gtcacgatcaaccccgccgtgatgccgcgcgcgcgcatccatcgccgctacgcggagctg
ttcgcgcaatcgagcggctcgaatcagtcgccgctcggccagcaactgcaggaggcgcgc
tggctgatccgcaacgcgcagaagcgtttcgacacgatccgccgcgtcggcgagtgcatc
gtcgagcggcagcgcgactttttccgctacggcgagatcgcgctgaagccgctcgtgctg
cgcgacatcgccgacgagctcggcctgcacgaatcgacgatctcgcgcgcgaccggcaac
aagtacatgtcgacgccgcacggcacgttcgagttcaagcacttcttcccgcgcaagctc
gaggcggcgggcaagggcgcgtgctcggcggccgtcgcgagggtgctgatccgcgacatg
atcgcggccgaacaggcgatcgatccgctgtcggacgtcgcgctcgcgcagcgtctggcg
gggcgcgggatcgtgctcgcgcgccgcaccgtcacgaagtatcggcaggcgatgaagatc
ccgcccgcggaattgcgccgccgcgcgcctctatga
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