Burkholderia pseudomallei 1710b: BURPS1710b_A2106
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Entry
BURPS1710b_A2106 CDS
T00289
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bpm
Burkholderia pseudomallei 1710b
Pathway
bpm00260
Glycine, serine and threonine metabolism
bpm00460
Cyanoamino acid metabolism
bpm00630
Glyoxylate and dicarboxylate metabolism
bpm00670
One carbon pool by folate
bpm00680
Methane metabolism
bpm01100
Metabolic pathways
bpm01110
Biosynthesis of secondary metabolites
bpm01120
Microbial metabolism in diverse environments
bpm01200
Carbon metabolism
bpm01230
Biosynthesis of amino acids
bpm01240
Biosynthesis of cofactors
bpm04981
Folate transport and metabolism
Module
bpm_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bpm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BURPS1710b_A2106 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BURPS1710b_A2106 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BURPS1710b_A2106 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BURPS1710b_A2106 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BURPS1710b_A2106 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BURPS1710b_A2106 (glyA)
Enzymes [BR:
bpm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BURPS1710b_A2106 (glyA)
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ABA51299
UniProt:
Q3JGP5
Structure
PDB
PDBj
LinkDB
All DBs
Position
II:2567724..2568998
Genome browser
AA seq
424 aa
AA seq
DB search
MSNANPFFSQSLAERDASVRGAILKELERQQSQVELIASENIVSRAVLDAQGSVLTNKYA
EGYPGKRYYGGCEFADEVEALAIERVKRLFNAGHANVQPHSGAQANGAVMLALAKPGDTV
LGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFS
AYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPR
GGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQA
LGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPT
ITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEALRTNPEGDHATEQRVRREIFALCER
FPIY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgccaatcccttcttctcgcaatcgctcgccgagcgcgacgcgtccgtgcgc
ggcgcgatcctcaaggaactcgaacgccagcagtcgcaagtcgagctgatcgcgtcggag
aacatcgtgtcgcgcgcggtgctcgatgcgcagggctcggtgctgaccaacaagtatgcg
gaaggctatccgggcaagcgctattacggcggttgcgaattcgccgacgaagtcgaggcg
ctcgcgatcgagcgcgtgaagcggctcttcaacgccggccatgcgaacgtgcagccgcac
tcgggcgcccaggcgaacggcgcggtgatgctcgcgctcgcgaagccgggcgacacggtg
ctcggaatgtcgctcgacgcgggcggacacctcacgcacggcgcgaagccggcgctgtcc
ggcaagtggttcaacgcgctccagtacggcgtgagccgcgacacgatgctgatcgattac
gaccaggtcgaggcgctcgcgcagcagcacaagccgagcctcatcatcgccggcttctcc
gcctatccgcgcaagctcgacttcgcgcggtttcgcgcgatcgccgattcggtcggcgcg
aagctgatggtcgacatggcgcatatcgccggcgtgatcgccgcgggccgccatgcgaac
ccggtcgaacacgcgcacgtcgtcacgtcgacgacgcacaagacgctgcgcggcccgcgc
ggcggcttcgtgctgaccaacgacgaggagatcgcgaagaagatcaactcggcggtgttc
cccggcctgcagggcggcccgctgatgcacgtgatcgccggcaaggcggtggcgttcggc
gaggcgctgacagacgatttcaagacctacatcgatcgcgtgctcgcgaacgcgcaggcg
ctcggcgacgtgctgaaggcgggcggcgtcgatctcgtgacgggcggcaccgacaaccat
ctgctgctcgtcgatctgcgcccgaagggcctgaagggcgcgcaggtcgagcaggcgctc
gagcgcgcgggcatcacgtgcaacaagaacggcattccgttcgatccggagaagccgacg
atcacgtcgggcatccgcctcggcacgccggcgggcacgacgcgcggcttcggcgcagcg
gagttccgcgaggtcggccggctgattctcgaggtgttcgaggccctgcgcacgaacccg
gaaggcgatcacgcgaccgaacagcgcgtgcggcgcgagatcttcgcgctttgcgaacgc
ttcccgatctactga
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