Burkholderia pseudomallei 1710b: BURPS1710b_A2454
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Entry
BURPS1710b_A2454 CDS
T00289
Name
(GenBank) Uvs006
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bpm
Burkholderia pseudomallei 1710b
Pathway
bpm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BURPS1710b_A2454
09124 Replication and repair
03420 Nucleotide excision repair
BURPS1710b_A2454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpm03021
]
BURPS1710b_A2454
03036 Chromosome and associated proteins [BR:
bpm03036
]
BURPS1710b_A2454
03400 DNA repair and recombination proteins [BR:
bpm03400
]
BURPS1710b_A2454
Enzymes [BR:
bpm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BURPS1710b_A2454
Transcription machinery [BR:
bpm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BURPS1710b_A2454
Chromosome and associated proteins [BR:
bpm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BURPS1710b_A2454
DNA repair and recombination proteins [BR:
bpm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BURPS1710b_A2454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-ProteinID:
ABA53062
UniProt:
Q3JFP9
LinkDB
All DBs
Position
II:2968355..2970595
Genome browser
AA seq
746 aa
AA seq
DB search
MCEFTARAGDLDLRFTPAPSALEGIAGHATVVSRRGTGYEKEIALSGEHRGLTVRGRADG
YDPALNRLEEIKTHRGDLDRMPANQRALHWAQARVYGHLLCESRGLAELSVALVYFDVGT
LRETVLTETHTAATLKAGFVEQCERFADWAAREDAHRAARDAALRALAFPHARFRSGQRE
LAVAAYRAARDGRVLLAQAPTGIGKTLGALFPLLKACGQAHLDRLFFLTAKTPGRALALD
AADTLRAAAGGVLPLRVLELVARDKACEHPDAACHGESCPLARGFYDRLAAARAAALEHG
RLDRAAVRAAALAHDVCPYYLAQELARWCDVVVGDYNYYYDGSALLHALTLQNQWRVGVL
VDEAHNLLDRARGMYSAALDQRELAGVRKLAPAPLAKALERLNREWNALNREQAGAYVVH
PDVPQRVLSAAQNLIGCFSEFAAQAPLALDDAVLRFCFDAIHFVALAEQFGTHSIFDATR
VRAGAPRRGGHASILCVRNVIPADFLAPRHGAARATVMFSGTLSPFDFYRDTLGLPGDTG
TLDVEGPFRAEQLTVKVASHVSTRWRDRERSLEPIVELIAEQYAARPGNYLGFLSSFEYL
QQVVARLRERHPALPVWEQAPGMDEAARDAFLARFEPNGRGIGFAVLGGAFSEGVDLAGD
RLIGAFVATLGLPQVNGVNEEMRRAMDARFGSGYDYIYLFPGLRKVVQAAGRVIRTEHDE
GVLHLIDDRFHRGEVRRLLPRWWRLS
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgaattcaccgcgcgcgcgggcgatctcgatctgcgcttcacgcccgcgccgagc
gcactcgagggcatcgccgggcacgcgacggtcgtatcgcgccgcggcaccggctacgaa
aaggagatcgcgctgtcgggcgagcatcgcggcctcacggtgcgcggccgcgcggacggt
tacgatccggcgctgaaccgcctcgaggaaatcaagacgcatcgcggcgatctcgacagg
atgcccgccaatcagcgcgcgctgcattgggcgcaggcgcgcgtgtacgggcatctgctg
tgcgaatcgcgcgggctcgcggagctgagcgtcgcgctcgtctatttcgacgtcgggacg
ctgcgcgagacggtgctgaccgagacgcacacggccgcgacgctgaaggcgggcttcgtc
gagcagtgcgagcgcttcgccgactgggcggcgcgcgaggacgcgcatcgcgccgcgcgc
gatgcggcgctgcgcgcgctcgcgtttccgcatgcgcgctttcgcagcggtcagcgcgaa
ctcgcggtcgccgcgtaccgcgccgcgcgcgacggccgtgtgctgctcgcgcaggcgccc
accggcatcggcaagacgctcggcgcgctgttcccgctgctgaaggcgtgcgggcaagcg
catctggaccggctctttttcctgaccgcgaagacgcccgggcgcgcgctcgcgctcgac
gcggccgatacgctgcgcgcggccgcgggcggcgtgctgccgctgcgggtgctcgagctc
gtcgcgcgcgacaaggcgtgcgagcacccggacgcggcgtgtcacggcgaatcgtgcccg
ctcgcgcgcggcttctacgatcggctcgcggccgcgcgcgccgccgcgctcgaacatggg
cggctcgatcgtgcggccgtgcgcgcggccgcgctcgcgcacgacgtgtgcccgtactat
ctcgcgcaggaactggcgcgctggtgcgacgtcgtcgtcggcgactacaactactactac
gacggcagcgcgctgctgcacgcgctcacgttgcagaaccagtggcgcgtcggcgtgctc
gtcgacgaggcgcacaacctgctcgaccgcgcgcgcgggatgtacagcgcggcgctcgac
cagcgcgagctcgccggcgtgcgcaagctcgcgcccgcgccgctcgcgaaggcgctcgag
cgcctgaatcgcgaatggaatgcgctcaatcgcgaacaggcgggggcgtacgtcgtgcat
ccggacgtgccgcagcgcgtgctgtcggccgcgcagaacctgatcgggtgcttctcggag
ttcgcggcgcaggcgccgctcgcgctcgacgacgcggtgctgcgcttctgtttcgacgcg
atccatttcgtcgcgctcgccgagcagttcggcacccattcgatcttcgacgcgacgcgc
gtgcgcgcaggcgcgccgcgccgcggcggccatgcgtcgatcctctgcgtgcgcaacgtg
attcccgccgacttcctcgcgccgcgccacggcgccgcgcgcgcgaccgtgatgttctcg
ggcacgctcagcccgttcgatttctaccgcgacacgctcgggctgccgggcgacaccggc
acgctcgacgtcgaggggccgtttcgcgcggagcaactgacagtgaaggtcgcctcgcat
gtgtcgacgcgctggcgcgaccgcgagcgctcgctcgagccgatcgtcgagctgatcgcc
gagcagtacgcggcgcggccgggcaattacctcggattcctgagcagcttcgagtatctg
cagcaagtggtcgcgcggctgcgcgagcgccatccggcgctgcccgtctgggagcaggcg
cccggcatggacgaggccgcgcgtgacgcgtttctcgcgcgcttcgagccgaacgggcgg
ggcatcggcttcgcggtgctgggcggtgcgttctcggaaggcgtcgatcttgccggcgac
cggctgatcggcgcgttcgtcgcgacgctcgggctgccgcaggtcaacggcgtcaacgag
gagatgcgtcgcgcgatggacgcgcgcttcggcagcggctacgactacatctacctgttt
ccggggctgcgcaaggtcgtgcaggcggcggggcgggtgattcgcaccgagcacgacgag
ggcgtgctgcatctgatcgacgaccgcttccaccgcggcgaggtgcggcggctgttgccg
cggtggtggcggctgagctga
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integrated database retrieval system
