Candidatus Blochmanniella pennsylvanica: BPEN_016
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Entry
BPEN_016 CDS
T00272
Symbol
gyrB
Name
(GenBank) DNA gyrase, subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bpn
Candidatus Blochmanniella pennsylvanica
Brite
KEGG Orthology (KO) [BR:
bpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpn03032
]
BPEN_016 (gyrB)
03400 DNA repair and recombination proteins [BR:
bpn03400
]
BPEN_016 (gyrB)
Enzymes [BR:
bpn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BPEN_016 (gyrB)
DNA replication proteins [BR:
bpn03032
]
Prokaryotic type
DNA Topoisomerases
BPEN_016 (gyrB)
DNA repair and recombination proteins [BR:
bpn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BPEN_016 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AAZ40666
UniProt:
Q494B5
LinkDB
All DBs
Position
16575..18989
Genome browser
AA seq
804 aa
AA seq
DB search
MLSAYDSSSIKILKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEAISGYCKKIV
VIIHQDHSVSVQDDGRGIPTGIHEEEGVSAAEVIMTILHAGGKFDNSNYKVSGGLHGVGV
SVVNALSERLELVIKRDFKTYKQVYCEGRPLSPLEIIGDSKHSGTIVRFWPSLKTFTGKT
EFQYDILARRFRELSFLNSGIVIILRDCRNNKEENFHCAGGVKAFVKYLSVNKTPIHPNI
FYYLGNKGEISIEVALQWNDNFQEKIYSFTNNIPQRDGGTHLAGLRAAITRTMHFYMDKE
GYNRKVKVVTIGDDAREGLVAILSIKIPDPKFSSQTKDKLVSSEVKTAVESLVYEKLIEF
FLENPIDSKNIINKVIGAARAREAARKIRDLTRRKGLSEFSTLPGKLADCQEKNPVYSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLTSQEVMTLITALGCGIGP
NEYNPDKLRYHNIIVMTDADVDGAHIRTLLLTFFYRQMPEIIERGHIFIAQPPLYKVQKG
RQERYLKDEEAMSKYQISIAVGSSRFYINPDTPPLKGKILEQLVFEYYLIQKIIVRMEHQ
FPKILLNRLIYHSVLSEEQCYCYESVKIWMRSLVDSLSSFEEYGSSYDFVILKHHENEYF
EPILRIRTYGINIDYVLSIDFIKSHEYKKLVSFGMQMNELFLSDAYIEYGIYRKQVHSFD
QAMEWLMQESRKGLVIQRYKGLGEMNPDQLWETTMNPKNRCMLRVTIKDAIEADHLFTTL
MGDLVEPRRAFIEKNALKATNVDY
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtgcttatgattcttcaagtattaagatcttaaaagggttggatgcagtacga
aaacgtcctgggatgtatattggagatactgacgatggaacaggattgcaccacatggta
tttgaggtagtagataatgctattgatgaagctatttcggggtattgtaaaaaaatagta
gtaataattcatcaggatcattcagtatcggttcaggatgatggacgcggtattcccacg
ggtatacatgaagaagaaggagtatctgcggctgaagttattatgactatattgcacgct
ggaggtaaatttgacaatagtaattacaaagtatcaggaggattacatggtgttggagta
tcagtagtaaacgcattgtcggagagattagagttagtaataaaaagagattttaaaacc
tacaaacaggtttattgtgaaggaagaccgttatcacctttagaaattataggcgatagc
aaacatagtggcaccatagtgcgattttggccaagtcttaaaacgtttacgggtaagact
gagtttcaatatgatattttagctagacgttttagagaattatcatttttaaattctgga
atcgtaattattttgcgtgattgtcgtaacaataaagaagaaaattttcattgtgcaggt
ggagtgaaagcttttgtaaaatatttgagtgtcaataaaacaccaattcatcctaatata
ttttattacttaggtaataagggggaaattagtatagaggttgcattacaatggaacgat
aactttcaagaaaagatatattctttcactaacaatatccctcaacgggatggagggact
catttagcaggattaagagctgctattacaagaacaatgcatttttatatggataaagaa
ggatataatagaaaagttaaggttgtaaccataggagacgatgctagagaaggacttgtt
gctatattatctattaaaataccggatccaaaattttcttctcaaactaaagataaattg
gtgtcatcagaggtgaaaactgccgttgagtcattagtttatgaaaagttaatagaattt
tttttagaaaacccaatagattctaagaatataataaataaagttataggggctgctcgt
gctcgagaagcagcgagaaaaattagagatttgacacgtcgtaagggtttgtcagagttt
tcaacacttccaggtaaattagctgattgtcaagaaaaaaatccagtttattctgaacta
tatttggtagaaggagattctgctggtggttctgcaaaacagggtagaaatcgtaaaaat
caagcaatattaccgcttaaagggaaaatcttgaatgtagaaaaagcacgtttcgataaa
atgttgacttctcaagaagtaatgacattaattactgctcttggatgtggcattggtcca
aatgaatataatccagataaattgagataccacaatatcatagtcatgacggatgcagat
gttgacggcgcgcatattcggactttgttattgacttttttttatcgccagatgccagaa
attattgaaagaggacatatatttatcgcgcaacctcctttatataaagttcagaaagga
cgccaagaacgatatcttaaagatgaagaggcaatgagtaaatatcaaatatcaatagca
gtaggaagttctcgtttttacattaatcctgatacgcctcctttgaaaggaaaaatattg
gaacaattagtttttgaatattatttaatacaaaaaattattgttcgtatggaacatcaa
tttcccaagatactattgaatagattaatttatcattcagttttatctgaggaacaatgt
tattgttatgaaagcgttaaaatatggatgagatctttagttgactctttgagtagtttt
gaagaatatggcagtagttacgattttgttattttaaaacatcatgagaatgaatatttt
gaacccatattacggatacgaacatatggaatcaacatagattatgtattaagtattgat
tttattaaaagtcatgaatataaaaaactagtatcttttggaatgcaaatgaatgaattg
tttctttcagacgcatatatagaatatgggatatatcgtaaacaggtacattcttttgat
caagcaatggaatggcttatgcaagaatctagaaaaggattagtaatacaacgttataaa
ggattaggtgaaatgaatccagatcaattatgggaaacaactatgaacccaaaaaacaga
tgtatgttgcgtgtcacaataaaagatgcgatagaagctgatcatttatttaccacactc
atgggtgatttagttgaaccaagacgtgcatttattgaaaagaacgcgttaaaagcaaca
aatgtagattactaa
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