Candidatus Blochmanniella pennsylvanica: BPEN_112
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Entry
BPEN_112 CDS
T00272
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bpn
Candidatus Blochmanniella pennsylvanica
Pathway
bpn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BPEN_112 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpn03019
]
BPEN_112 (pnp)
03016 Transfer RNA biogenesis [BR:
bpn03016
]
BPEN_112 (pnp)
Enzymes [BR:
bpn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BPEN_112 (pnp)
Messenger RNA biogenesis [BR:
bpn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BPEN_112 (pnp)
Transfer RNA biogenesis [BR:
bpn03016
]
Prokaryotic type
tRNA degradation factors
BPEN_112 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
OB_RRP5_4th
S1_RRP5
KH_2
S1_2
Ribosomal_L6
Motif
Other DBs
NCBI-ProteinID:
AAZ40752
UniProt:
Q493T3
LinkDB
All DBs
Position
130316..132415
Genome browser
AA seq
699 aa
AA seq
DB search
MLDPIIHKFKYGQHTVILDIGTIARQANAAVMVSMSDTTVLVTVVSSNQVRLEQDFFPLV
VNYQERTYAAGKFPGGFFRREGRPSENETLTSRLIDRPIRPLFPKGFINDVQVVATVVSV
NPQVNPDIVAIIGVSAALSLSDIPFFGPIGAARVGYIKNQYVLNPTTTELSNSKLDLVIS
GTESNILMVESESCLLSEKEILDAIIFGHEQQQIVIHNINKLVKKVGKTKYSWNEKEVNI
SLKTYLSELYESRAQDIYCFFDKKERHAQVDSIKKDIVKTVLNSYQHAAVDEKEIMYLLN
YLEAQSIRYRILTNKLRIDGRSQDTIRKIDIKTGILPRTHGSALFTRGDTQALVAVTLGT
ERDAQNIDGLTGIRVDRFLLHYNFPPYCVGEIGVIGAPKRREIGHGRLAKRGMLAVMPNA
NEFPYTIRVVSEITESNGSSSMASICGTSLALMDAGVPIKAAVAGVAMGLIKEGNDFVVL
SDIVSDEDHIGDMDFKVSGSRQGITALQMDIKTDGITYDIINIALKKAKNARLQILDVME
QIIKFPNQEISKFAPRIYSIKVNPDKIKDVIGKGGSVIRSLTEETNTIIDIEDNGIIKIV
ALDYDKAKQAIRRINDITANVEIGAVYTGKVSHIVEFGAFVTILSGKEGLVHISQISERR
INKVTDYLKLGQKVLVKVLEIDRQGRIRLSMKGVHQVSA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
ttgttagatccgattattcataaatttaaatatggacagcatactgtaattttagatatt
ggaaccatagctcgtcaagcaaatgctgcagtcatggtgagtatgagtgatactacagta
ttagttacagtagttagttctaatcaagtcagattagaacaagatttttttcctcttgtt
gtaaattatcaagaacgcacttatgctgctggaaaatttccaggaggtttttttcgtcga
gaaggtcgaccaagtgaaaacgaaacattaacgtctcgcttgattgatcgccctattcgg
ccgttattccctaagggatttattaatgatgtacaagtagttgctacggtagtatcagta
aatccgcaagtaaatccagatattgtagcaataataggagtatctgctgcattgagtttg
tctgatattccattttttggacccattggagcagctagagttggttatattaaaaatcaa
tatgtattaaatccaacaacaacagagttatctaatagtaagttagatttggtgatttca
gggactgaatctaatatcttgatggtggaatcagaatcgtgtttactaagtgaaaaagaa
attttagacgctattatatttggtcacgaacaacaacaaatagtgattcataatattaat
aaattagttaaaaaagttggaaaaactaagtattcttggaacgaaaaggaagtgaacata
tctttaaaaacgtatttatctgaattgtatgagtctcgtgcgcaagatatatattgtttt
tttgataaaaaagagcgtcatgctcaagttgatagtattaagaaagatatagtaaaaacc
gttcttaatagctaccagcatgctgctgtagatgaaaaagaaataatgtatcttttaaat
tatttagaagcgcaatcaattcgttatcgtattttaacgaacaaattacgtattgatgga
cgttcacaagatacaattcggaaaatagatataaaaacaggcatattaccacgtactcat
ggatcagcattatttactagaggagatactcaagcgctggttgctgttacgcttggcaca
gaacgtgatgcacagaatattgatggattaactggtattcgtgtggatagatttttatta
cattataattttccaccatattgtgtaggtgaaataggtgtcataggagctccaaaaagg
agagaaataggacatggacgtttagccaaacggggtatgttagcagttatgcctaatgct
aatgagtttccgtatacaatacgtgtagtatcagaaattactgaatctaatggatcgtcc
tccatggcatctatttgtggtacatcattagcgttgatggatgctggagtaccgattaaa
gcagcagttgctggtgttgctatgggtctgattaaggaaggaaacgatttcgtggtatta
tctgatattgttagcgatgaagatcatattggagatatggattttaaagtatctggtagt
cgtcaaggcataacagcattgcaaatggatattaaaacggacgggattacgtatgatata
ataaatattgcgttaaaaaaagcaaaaaatgctcgactgcaaatattagatgttatggaa
caaattattaagtttcctaatcaggaaatctctaaatttgctcccaggatatatagcatt
aaagttaatccagataaaattaaagatgttataggaaagggagggtcagttattcgctca
ttgactgaagaaactaatactattattgatattgaagataatggtatcataaaaatagtt
gctttagattatgataaagcaaaacaagctattcgtagaattaatgatatcactgcaaac
gttgaaataggagccgtttatactggaaaagttagtcacattgtggaatttggggcattc
gttactatcctttctggaaaagaagggttagttcatatttcccagatttctgaaagaaga
ataaataaagtaactgattatttgaaattagggcaaaaagtattagtaaaagtgttagaa
atagatcgtcagggacgaattcgtttgagtatgaaaggagtacatcaagtgagtgcatag
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