Candidatus Blochmanniella pennsylvanica: BPEN_476
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Entry
BPEN_476 CDS
T00272
Symbol
sbcB
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
bpn
Candidatus Blochmanniella pennsylvanica
Pathway
bpn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BPEN_476 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpn03400
]
BPEN_476 (sbcB)
Enzymes [BR:
bpn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
BPEN_476 (sbcB)
DNA repair and recombination proteins [BR:
bpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BPEN_476 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BPEN_476 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BPEN_476 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_C
ExoI_SH3
RNase_T
SAM_CEP-1_C
Motif
Other DBs
NCBI-ProteinID:
AAZ41092
UniProt:
Q492K5
LinkDB
All DBs
Position
567703..569205
Genome browser
AA seq
500 aa
AA seq
DB search
MLTHINVSQPSFFIYDYETFGINPALDRPAQFAGIRTNNTLKPIEKEKIFFCRLSNDYLP
DPQSVLITGIAPQDTLRHGLIESEFARRIHQLFCIPKTCILGYNNIHFDDEFSRNIFYRN
FHDPYLWAYQRGNSRWDLLHVLRACYSLCPNGITWPLNIQNKPSFRLKDLTQANAIKHLS
AHDAMSDVYATLELTKLIKEAQPQLFQFLFDHRTKYQLQKIIDLDTMNPLIFIMNKINNK
YKNFITYIAPISRHPINPNILIACDLNGNIDNLVNLNINTIYQKLYSNHITIYDILKKIP
LRFIRLNACPILIPINFFEKNNINTTYTMQLSTNYRYCLKNLNFIRMHENSVYLRNKINT
LYTIIGSYINQKNIYNNLHVDSQLYHRLFNNSDRKIIESIRRTHSKELKNLCTDHVDTRL
KPLLFYYRARNFPNTLNYQEQKKWLNYKKNKLFNTDQSKSYNDKLNQLLSIYKYNDQKIT
LLHSLQKYYQYLYEVHFNFY
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgctaacacatattaatgtatcacaacctagtttttttatttatgattatgaaactttt
ggcatcaatccagcactagatagaccagcgcaatttgccggaattcgtacgaataacaca
ttaaaacctatagaaaaagaaaaaatcttcttttgtcgcttatcaaatgattatctcccc
gatccgcaatccgtcctcattactggaatcgctcctcaagataccttgcgtcatggattg
attgaatctgagttcgctcgtcgtattcatcaactattttgtatccctaaaacttgtatt
cttggatacaataatattcattttgacgatgaattcagtagaaacattttttatagaaat
tttcatgacccttacttatgggcttatcagcgaggaaattcccgatgggacttattacac
gtactacgtgcctgttattcactatgtccaaatggcattacatggccattgaacattcaa
aataaacccagctttcgtctaaaagatttaacacaagcaaatgctataaaacatctcagc
gcacatgacgctatgtcggatgtctacgctactttagaattaacaaaattaataaaagaa
gctcagccacaattatttcaatttctatttgatcatcgtaccaaatatcaattgcaaaaa
ataatcgatctagataccatgaatcctttgatatttatcatgaacaaaataaataataaa
tataaaaattttataacttatatagctccaatttctcgacatcccatcaatcctaacatt
ttaatagcatgcgatttaaatggtaatatagataatttagttaatttaaatatcaatacg
atatatcaaaaattgtactctaatcacataacgatatatgatattttaaaaaaaatacca
ctacgatttattcgattaaatgcgtgccctatattaataccaataaacttttttgaaaaa
aacaatattaacactacttacaccatgcagctctctaccaattatcgatactgtttaaaa
aatttaaattttattagaatgcatgaaaatagcgtctatctacgtaataaaataaataca
ctatataccattataggatcttacatcaatcaaaaaaatatatataataatcttcatgta
gacagtcaattatatcatagactcttcaataattctgatcgtaaaataattgaaagcatc
cgtagaactcattcaaaagagttgaaaaatttatgcactgaccacgttgatactcgttta
aaaccactcttattttactatagagcccgaaattttcctaatactttaaattaccaagaa
caaaaaaaatggttgaactataaaaaaaataaattatttaatacagatcaatcaaaatct
tataacgataaactaaatcaacttctgtcaatctataaatataatgatcaaaaaattaca
cttctacattcattacaaaaatattatcaatatctttatgaagttcattttaatttttat
taa
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