Brachyspira pilosicoli 95/1000: BP951000_0999
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Entry
BP951000_0999 CDS
T01278
Symbol
rho
Name
(GenBank) transcription termination factor, Rho
KO
K03628
transcription termination factor Rho
Organism
bpo
Brachyspira pilosicoli 95/1000
Pathway
bpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BP951000_0999 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpo03021
]
BP951000_0999 (rho)
03019 Messenger RNA biogenesis [BR:
bpo03019
]
BP951000_0999 (rho)
Transcription machinery [BR:
bpo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BP951000_0999 (rho)
Messenger RNA biogenesis [BR:
bpo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BP951000_0999 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
Rho_N
OB_RNB
AAA_22
AAA_25
AAA
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ADK30990
UniProt:
D8ICW7
LinkDB
All DBs
Position
complement(1116659..1118131)
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AA seq
490 aa
AA seq
DB search
MSEDNNLEFSADENVVPLKKVRKVRKVVRKVVTKVQEEEKEEIPTTNDEDNNKEEENSNK
IQRPFDVLYISQLSVLTFDELIDFAENYGIKKDTNSNLRRQELMHLIVKSHINLEGKVVA
EGTLETLQDGFGFLRSKNTNYLVGSDDIYISPAQIRLFGLRTGDVISGEVRPPKDNAGEK
FFALLRIESVNGEKPDNLHRRPLFDKLTPIFPNERINLEFAPNKISTRIINLVSPIGKGQ
RGLIVAPPKAGKTMMLQEIANAICKNYPDIKLFILLIDERPEEVTDMKRQVPEAEVIAST
FDELPEKHCQVSEMVLEKAKRLVENKHDVVIILDSITRLSRAYNLVVPASGKVLTGGVDS
NALHKPKKFFGAARNIEEGGSLTIIASALVDTGSKMDDYIYEEFKGTGNMELHLERKFAN
RRIFPAIDIDSSSTRRDDLLLNEEELAKMNLVRSVQGQGINIDEYDFIEKMIAKMKNTKD
NSEFLKLLNS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagataacaatttagagttttctgctgatgaaaatgttgtgcctttgaagaag
gtaagaaaagtaagaaaagttgttagaaaggttgttactaaagttcaagaagaagaaaaa
gaagaaattcctactactaatgatgaagataataataaagaggaagagaatagtaataaa
attcaaagaccttttgatgtactttatattagccaattaagcgttttaacttttgacgaa
ttaatagattttgctgaaaattatggcattaagaaagatactaacagcaatttaagaaga
caggaattaatgcatttaatagtaaaatctcatattaatttagaaggtaaagttgttgca
gagggtactttagaaactttgcaagacggatttggtttcttacgttctaaaaacacaaat
tacttagtaggttctgatgacatatatatatctcctgcacaaattaggcttttcggactt
agaacaggagatgttattagcggagaagtaagacctcctaaagataatgcaggtgaaaag
ttttttgctttgcttagaatagaatctgttaatggcgaaaaacctgataatttgcataga
agacctttatttgataaactcacaccaatatttcctaatgaaagaattaatttagagttt
gctccaaataaaatttctactcgtattataaacttagtatctcctataggtaaaggccag
aggggattaatagtagcacctcctaaagctggtaaaactatgatgcttcaagagattgct
aatgctatatgtaaaaactatcctgatattaaacttttcattcttcttatagatgagcgt
cctgaagaggttactgacatgaaaagacaagttccagaggctgaagttatagcttctact
tttgatgaacttccagagaagcattgtcaagtttcagagatggtattagagaaggctaag
agattagttgaaaataaacatgatgttgtaattatattagattctataacaagactttca
agggcttacaacttagtagtgcctgcaagcggtaaggtattaacaggaggtgtagattct
aatgcacttcataaacctaaaaaattcttcggtgctgcacgtaatatagaagagggcggc
tctcttacaataattgcttctgctttagttgatactggaagtaagatggacgattatatt
tacgaagagtttaagggtactggtaatatggagcttcatttagagaggaagtttgctaat
agaagaatattccctgctattgatattgattcttcttctactagaagagatgatttactt
cttaatgaggaagagcttgctaagatgaatcttgttagaagcgttcagggtcagggtatc
aatattgatgaatacgactttattgagaagatgatagctaaaatgaaaaatactaaagat
aattctgagtttttaaagttattaaactcatga
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