Brachyspira pilosicoli 95/1000: BP951000_1252
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Entry
BP951000_1252 CDS
T01278
Symbol
pcrA
Name
(GenBank) ATP dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpo
Brachyspira pilosicoli 95/1000
Pathway
bpo03420
Nucleotide excision repair
bpo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BP951000_1252 (pcrA)
03430 Mismatch repair
BP951000_1252 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpo03400
]
BP951000_1252 (pcrA)
Enzymes [BR:
bpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BP951000_1252 (pcrA)
DNA repair and recombination proteins [BR:
bpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BP951000_1252 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
BP951000_1252 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
LepB_GAP_N
ResIII
DEAD
Asp_Glu_race
Motif
Other DBs
NCBI-ProteinID:
ADK31241
UniProt:
D8IDL8
LinkDB
All DBs
Position
1371835..1373817
Genome browser
AA seq
660 aa
AA seq
DB search
MLNEEQKKAVEHINGPMLALAGAGSGKTRVITERIAYLIKNGIDPSNILAVTFTNKAANE
MRERIASLLKEKPKQLVISTFHSFCVRVLKLDIDKLGYKKNFSIYSSSDSRTLIRNILRE
VKVNTLNYDENLFAWYIDRYKNNLMKPNEVVPHDDLEKIAKRVYEVYQNYLKGYNAVDFN
DLINLTIDLYINFPDVLDKYQERFKYIMVDEYQDTNLAQYKLTSLLASKYKNIVVVGDDD
QSIYAFRGADVSNILSFENEYPEAKIITLNKNYRSTKAILEAAHAVISNNTQRKAKEVVA
VNDEGIPPVIMPCEDERDEAQFIAENITQTAINKNLNYENFAILFRMNSQSRIFEEALRF
RGIPYTVVGAFQFYERKEIKDILAYLNLFVNPEDEVSLLRVINIPKRGIGAVAINNLNEI
SIKNGVSLYQTLLDYENIDDIPPKAKTGIKDFLDIIHYYNEIFTVDKNTLEKPKLYENIN
KFLDTIAYHNEVLNSSDTKEQGSKKIENIESLMNGIAEYEKGNKNATLKNYLDRILLMSI
EENNEEEKKKGVMLMSIHAAKGLEFPYVYICGMEDGILPHHKSSSEREIEEERRLCYVAM
TRAKKHLTLTYCMKRKKQGRDVECTPSIFLEEMRKGLPEDMAMDEEEFFSNLKATLKPDS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatgaagagcaaaaaaaagctgtagagcatattaatggacctatgcttgcatta
gccggtgcaggaagcggtaagaccagagtaattacagagagaattgcctatttaataaaa
aacggaatagaccctagtaatatacttgctgttacttttacaaataaagctgctaatgaa
atgcgtgagagaatagctagtttgcttaaagaaaaacctaaacaattagtaataagtact
tttcattctttttgtgtgagggtgcttaaacttgatatagataaattaggatacaaaaaa
aactttagtatatattcttcttcagacagcagaactcttataagaaatattttgagagag
gttaaagtaaatactcttaattatgatgaaaatctatttgcttggtatatagacagatac
aaaaacaatttaatgaagccaaatgaagtagtgcctcatgatgatttggagaagattgca
aaaagagtttatgaggtttatcagaattatttgaaagggtataatgctgttgattttaat
gaccttattaatttaactattgatttatatattaattttcctgatgttttagataagtat
caagagagatttaaatatattatggttgatgaatatcaagacaccaatttagcacagtat
aaactcacaagccttttagcttcaaaatataaaaatatagttgtagtaggcgatgatgac
cagagtatatacgcttttaggggtgctgatgtatcaaatatactttcttttgaaaacgaa
tatccagaagctaaaataattacattaaacaaaaattatagaagcactaaagcgatactt
gaagcggcacatgctgtaataagcaacaatacgcaaagaaaagcaaaagaggttgttgct
gttaatgatgaaggtatacctcctgttattatgccctgcgaagatgagagagatgaggca
cagtttatagcagaaaatatcacacaaactgcaataaacaaaaatttaaactacgaaaac
tttgccatactttttagaatgaactctcagtcgcgtatttttgaagaggctttaagattt
agggggattccatatactgtggttggtgcttttcagttttatgagagaaaagagattaaa
gatatacttgcatatttaaacctatttgttaatccggaagatgaggtttctcttttgagg
gttattaatataccaaaaaggggaattggtgctgttgcaattaataatctcaatgaaata
agtataaaaaacggagtatcattatatcaaacattactcgactatgagaatatagatgat
atacctccaaaggcaaaaacaggaataaaagattttttggatatcattcattattataat
gaaatatttacagttgataaaaacacattagaaaaaccaaagctctacgaaaacattaat
aaatttttagatacaattgcatatcataatgaagtattaaactcaagcgatacaaaagag
cagggaagcaaaaaaatagaaaatattgaatctctaatgaatggtatagctgaatatgag
aaaggaaataaaaacgctactttaaaaaattatttagatagaatacttttaatgagcata
gaagaaaataatgaagaagagaaaaagaaaggtgtaatgcttatgagtatacatgctgca
aaggggttggagtttccttatgtttatatatgcggtatggaagacggcatacttccgcat
cataaaagttcatcagagagagagatagaagaagagagaagactttgctatgttgctatg
acgagggcaaaaaagcacctcacattaacatattgcatgaaaagaaaaaagcaaggaaga
gatgttgaatgcactccgtcaatatttttggaagagatgagaaaaggccttccagaagat
atggcaatggacgaagaagagtttttttcaaacctcaaagccacattgaagccagattct
taa
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