Brachyspira pilosicoli 95/1000: BP951000_1693
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Entry
BP951000_1693 CDS
T01278
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bpo
Brachyspira pilosicoli 95/1000
Pathway
bpo03410
Base excision repair
bpo03430
Mismatch repair
bpo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BP951000_1693 (recJ)
03430 Mismatch repair
BP951000_1693 (recJ)
03440 Homologous recombination
BP951000_1693 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpo03400
]
BP951000_1693 (recJ)
DNA repair and recombination proteins [BR:
bpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BP951000_1693 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BP951000_1693 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BP951000_1693 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DNA_ligase_aden
aBig_2
Motif
Other DBs
NCBI-ProteinID:
ADK31674
UniProt:
D8IEV1
LinkDB
All DBs
Position
1848728..1850899
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AA seq
723 aa
AA seq
DB search
MQKIDIDNLNPIIKELLKLRGVVSKEDIFDFFFQDIYSLSNPFNIRDMNAFVDRLKEAIE
YNEKILIYGDKDADGVTAASIIYNTLKAVTKNVEAFVPNHEVGYGLSKDVIESYANSGVS
LIITVDCGISNVEEVEFAREHSIDIIVTDHHDIPEILPNAYLIFNPKLSNTGFVSKNFSG
CAVAFKLMQAFVFSYTKLYNKDIIILDYEIDKNTDKLKRIRALKATNFVYSDDVFGFELV
NNDNAYKSIYLDYYEEFLSEDEVLEELASYMFEGENVVLVLTGGEIRLKKLLRLYEKYEL
YLPEYDNVYDLLQLGANYGGVNIKSVKTLDEFALLLKVNIYKYDNILYRDLIIKMEIFRR
MYYLSQKQLQNYIKRESILVLFGTVADVVPLIEENRAYIKCALAELEKPNHIRYNVILER
IKLLNTKVDTQAVSWRLAPFINAAGRMGKPEYALRLLTSETREEAFQLSEEVYNLNETRK
SLTESNFNIVCEYIKENNCMSYPIIIVKSDLIDRGLTGLIAGKVLSQYGKTAVILYESKE
DGVCTGSIRSRGDDNARDMLEYSSVYLDKFGGHKNAAGFTVSVNNFEKFAKKIIKYASEE
NFNTSKDEKTYDLELDFKDINMQFAEYLELFEPYGFANEEPVFSTNRVTINSIEKINKNN
KIHLKLQLQKNGIRANAIIWSSSEEECSKLEASNFINISYKIKINRFNGSKEVKIYIENY
EIN
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaattgacatagataatttgaatcctattataaaagagttgcttaaattaagg
ggagtagtttcaaaagaagatatttttgattttttctttcaagatatatattcgctttct
aatccatttaatattagggatatgaatgcttttgtagataggctaaaagaagctatagag
tataatgaaaaaatattgatatatggcgataaagatgctgacggtgttactgctgcttct
ataatatataatactcttaaggctgttacaaaaaatgttgaggcttttgtgcctaatcat
gaagtgggatatgggctttcaaaagatgtcattgaaagttatgctaattctggggtgagt
ttaatcattacggttgattgcggtatatcgaatgttgaagaagttgagtttgcaagagag
cattctatagatattatagtaacagaccatcatgatatacctgaaatacttccaaatgct
tacttaatatttaatcctaaactttcaaatactggttttgtttccaaaaacttttctggg
tgtgctgttgcatttaagcttatgcaggcatttgttttttcttatacaaaactttataac
aaagatatcattatattagattatgagatagataaaaatactgataaattaaaaagaata
agagcattaaaggctactaattttgtttatagtgatgatgtatttggctttgagcttgta
aataatgataatgcttacaaatctatttatttagattattatgaagagtttttgtcggaa
gatgaagttttagaagagttagctagttatatgtttgagggggagaatgttgtattggtt
ttaactggcggagagattaggcttaaaaaacttcttagactatacgaaaagtatgagcta
tatttgcctgaatatgataatgtttatgatttacttcagttgggtgctaattatggcgga
gttaatatcaaatcagtaaaaacattagatgagtttgctttgcttcttaaagttaatata
tataagtatgataatattctctatagagacttaataataaaaatggaaatttttagaaga
atgtattatttaagtcaaaagcaattgcaaaactatataaaaagagaatctatattagta
ttgtttggaacagttgccgatgttgtaccgcttattgaagagaatagggcttatataaaa
tgtgctttggcagaattggaaaagcctaatcatataaggtataatgtgatactagagaga
ataaaactattaaacactaaagttgatactcaggctgtaagctggagacttgctcctttt
attaatgctgcgggtagaatgggaaagcctgaatatgctttaaggcttttaacttctgaa
actagagaagaggcttttcaattgtctgaagaagtttataatttaaacgaaacaagaaaa
tctcttacagaaagcaattttaatatagtgtgcgaatatataaaagaaaataattgcatg
tcttatcctattataatagtaaagagtgatttaatagatagaggtttaacaggtcttata
gcgggtaaagttttaagtcaatatggaaagactgctgttatactttatgaatccaaagaa
gatggagtttgtacgggtagtattagaagcagaggtgatgacaatgctcgcgatatgctt
gagtattctagtgtttatttagataagtttggcgggcataagaatgctgctggttttact
gtgagtgtaaacaattttgaaaagtttgctaaaaaaattattaaatatgcttcggaagag
aattttaacacttcaaaagatgaaaagacttatgatttggaattagattttaaagacatt
aatatgcaatttgctgagtatttagaattatttgagccttatggttttgctaatgaagag
cctgtgttttctacaaatagggttactataaactctatagagaaaataaacaaaaacaat
aagattcatttaaaattacaattacaaaaaaatggcatcagagctaatgctataatttgg
agttcatcagaagaagaatgctctaaattggaagcttcaaattttataaatatttcgtac
aagataaaaataaatagatttaatggaagcaaagaagtaaagatttatatagagaattat
gagataaattaa
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