Brachyspira pilosicoli 95/1000: BP951000_1827
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Entry
BP951000_1827 CDS
T01278
Symbol
ligT
Name
(GenBank) 2-5 RNA ligase, LigT
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bpo
Brachyspira pilosicoli 95/1000
Brite
KEGG Orthology (KO) [BR:
bpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpo03016
]
BP951000_1827 (ligT)
Enzymes [BR:
bpo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BP951000_1827 (ligT)
Transfer RNA biogenesis [BR:
bpo03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BP951000_1827 (ligT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
Motif
Other DBs
NCBI-ProteinID:
ADK31807
UniProt:
D8IF84
LinkDB
All DBs
Position
complement(1998403..1998933)
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AA seq
176 aa
AA seq
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MRAFLALNIDENIKNKYHNLLLKKIDDNIAEVKFVNKNKMHITLVFFENINESDIEKIKS
SLEKTSNVIKPFNILFEKLSYFTNKFNDINVLFVKANCKELDEYVKHLRDNINIKYDKKD
FKSHLTLARVKKVHDNDKLKEIVNNISFEKSSFLANSITLYESDFVNYREIFTLTF
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgagagcgttcttagcattaaatattgatgaaaatataaaaaataaataccataatctt
ttactaaaaaagatagatgataatatagcagaagttaaatttgtaaataaaaataaaatg
catatcacattagttttttttgaaaatataaatgaaagcgatatagaaaaaataaaatca
tcattagaaaaaacaagcaatgtaataaagccttttaatatattatttgaaaaactctca
tatttcacaaataagtttaatgatataaatgttttgtttgtaaaagcaaattgcaaagaa
ttagatgaatatgtaaagcatttaagagataatattaatataaaatatgacaaaaaagat
tttaaatcgcatctcacactggcaagagtaaaaaaagttcatgataatgataaattaaaa
gagatagtaaataatattagttttgaaaagagcagttttttagcgaactctatcacactt
tatgaaagcgactttgttaattacagagaaatattcacattaacattttaa
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