Brachyspira pilosicoli 95/1000: BP951000_2084
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Entry
BP951000_2084 CDS
T01278
Name
(GenBank) metallo-beta-lactamase family protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bpo
Brachyspira pilosicoli 95/1000
Pathway
bpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BP951000_2084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpo03019
]
BP951000_2084
Messenger RNA biogenesis [BR:
bpo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BP951000_2084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RMMBL
RNase_J_C
Lactamase_B_2
Anti-Pycsar_Apyc1
ODP
Motif
Other DBs
NCBI-ProteinID:
ADK32061
UniProt:
D8IFZ7
LinkDB
All DBs
Position
complement(2287887..2289740)
Genome browser
AA seq
617 aa
AA seq
DB search
MNNNDKIRIIPLGGVQEIGMNMTVIEYGDEVLIVDCGFMFPKYHMLGIDYVIPDTSYLED
KNIVGLVLTHGHEDHIGAIPHFLRKFPDIQIYGSRLTAAFLRAKLNDYKNEYKDVNIYEL
EPRNKIKIGINFDIEFIRVNHSIPDGVGVAITTPLGVIIHTGDFKVDLNPTTDKFIDLYK
FAEYGENGVLLLLADSTNCHKNGFSMSESVVQNTMTPLFAYEDGMIIVAVFASSIERIQD
LVTAAKINNKYVAFSGRSLLKYTKIAQEMGYLNLYDIVIPIDKLNRYPREKIVCITTGTQ
GEPYSSLSLIAAEAHKHIKVEDGDMVIFSSSVIPGNEMSVTRMINNLYDLGAKMVGEDKK
LLHVSGHASSEDLKLMYRLVKPKYFIPIHGEKRHLISHIKLVEELNGLNSKGFLLYNGNV
LEIDSSLEAKIAEPIEIRNIYVDGKGVGDLEDSIFFDREQLSLNGVVVANVVAKKNKTGN
YDINIDIESKGFTYNGAEKSSIITKNEELIKEGKNSATEAVRKLLNRNKRTPSTIKYEVR
EALRKKFIQIIGREPVIFVSLYIDNVYIEVEENNTEEEICTNKTTKSKKIIHKKKVRNIQ
IAAKKPKKKKIKKAKDL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaacaataatgataagataagaatcatacctttaggcggcgtacaagaaattggtatg
aatatgactgttatagagtatggagatgaagtattaatagttgattgcggatttatgttt
cctaaatatcatatgcttggtatagattatgtaatacctgatacttcatatttggaagat
aaaaatatagttggattagtattaactcatggacatgaagaccatataggagctatacct
catttcttaagaaaatttcctgatatacaaatttatggttcaagattaacagcagcattt
ttaagagctaaattaaatgactataaaaatgaatataaagatgttaatatttatgaatta
gagcctagaaataaaattaaaataggaataaactttgatatagagtttataagagttaat
catagtatacctgacggtgttggtgttgctatcactactcctcttggtgttataatacat
acaggagatttcaaagttgatttaaatcctactacagataagtttatagacctttataag
tttgcggaatatggtgaaaatggtgttttgcttcttttagcagattctacaaactgtcat
aaaaatggtttttctatgagtgagagcgttgttcaaaatacaatgacacctctatttgca
tatgaagacggtatgataattgttgctgtttttgcaagcagtattgagagaatacaggat
ttggtaactgctgctaagattaacaataaatatgttgctttttctggaagaagcttactt
aaatatacaaagatagcacaagagatgggatatttaaatctatatgatatagtgatacct
atagataaattaaacagatacccaagagaaaaaattgtatgtatcacaacaggaacacag
ggagagccttactcttctctttcattgatagctgctgaggctcataagcatataaaagta
gaagacggagatatggtaatattttcttctagtgttatacctggtaatgaaatgtctgtt
acaagaatgattaacaatctctatgaccttggagctaaaatggttggtgaggataaaaaa
cttcttcatgtatctgggcatgcttcaagtgaagatttgaaacttatgtacagactagta
aaaccaaaatactttatacctattcacggagagaaaaggcatttaattagtcatataaaa
ttagtagaagagcttaatgggcttaattctaaaggttttctactttataatggtaatgtg
cttgaaatagatagttctttagaagcaaaaatcgctgagcctatagagataagaaatatt
tatgttgatggtaagggtgttggagatttagaagatagcatattcttcgatagagaacaa
ttatcattaaacggtgttgttgttgctaatgtagttgccaaaaaaaataaaactggaaat
tatgatataaacatagatatagaaagtaaaggttttacatataatggagcagaaaaatct
tctataataactaaaaacgaagagcttattaaagaaggtaaaaactctgcaacagaagca
gttagaaaattacttaatagaaataaaagaacaccttctactattaaatatgaagtgcgt
gaagctttaagaaagaagtttatacagataataggaagagagcctgttatattcgtatca
ctttatatagataatgtttatatagaggtagaagaaaataatacagaggaggaaatatgt
acgaacaagacaaccaagagcaagaaaataatacacaagaagaaagtaaggaatatacaa
atagcagcaaagaaaccgaaaaaaaagaaaataaagaaagcaaaagatttataa
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